Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP7AQ04656 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC20.96■□□□□ 0.95
ATP7AQ04656 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP7AQ04656 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
ATP7AQ04656 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP7AQ04656 PES1P2-201ENST00000449745 1735 ntBASIC20.96■□□□□ 0.95
ATP7AQ04656 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
ATP7AQ04656 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC20.95■□□□□ 0.95
ATP7AQ04656 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATP7AQ04656 NQO2-204ENST00000380454 851 ntTSL 2 BASIC20.95■□□□□ 0.94
ATP7AQ04656 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP7AQ04656 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC20.95■□□□□ 0.94
ATP7AQ04656 EEF1DP5-201ENST00000431410 772 ntBASIC20.95■□□□□ 0.94
ATP7AQ04656 HIST1H2APS2-201ENST00000454426 370 ntBASIC20.95■□□□□ 0.94
ATP7AQ04656 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
ATP7AQ04656 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC20.95■□□□□ 0.94
ATP7AQ04656 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC20.95■□□□□ 0.94
ATP7AQ04656 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC20.95■□□□□ 0.94
ATP7AQ04656 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP7AQ04656 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC20.95■□□□□ 0.94
ATP7AQ04656 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
ATP7AQ04656 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP7AQ04656 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATP7AQ04656 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATP7AQ04656 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATP7AQ04656 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP7AQ04656 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP7AQ04656 HTR7P1-202ENST00000624664 4411 ntBASIC20.95■□□□□ 0.94
ATP7AQ04656 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC20.95■□□□□ 0.94
ATP7AQ04656 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATP7AQ04656 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
ATP7AQ04656 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP7AQ04656 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP7AQ04656 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC20.94■□□□□ 0.94
ATP7AQ04656 KRT18P15-201ENST00000458108 1291 ntBASIC20.94■□□□□ 0.94
ATP7AQ04656 AC020904.3-201ENST00000624199 442 ntBASIC20.94■□□□□ 0.94
ATP7AQ04656 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC20.94■□□□□ 0.94
ATP7AQ04656 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC20.94■□□□□ 0.94
ATP7AQ04656 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP7AQ04656 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
ATP7AQ04656 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP7AQ04656 WARS-203ENST00000358655 2466 ntTSL 2 BASIC20.94■□□□□ 0.94
ATP7AQ04656 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP7AQ04656 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATP7AQ04656 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP7AQ04656 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP7AQ04656 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC20.94■□□□□ 0.94
ATP7AQ04656 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP7AQ04656 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP7AQ04656 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
ATP7AQ04656 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATP7AQ04656 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC20.94■□□□□ 0.94
ATP7AQ04656 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC20.94■□□□□ 0.94
ATP7AQ04656 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC20.94■□□□□ 0.94
ATP7AQ04656 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATP7AQ04656 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP7AQ04656 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
ATP7AQ04656 RNA5SP491-201ENST00000362936 118 ntBASIC20.94■□□□□ 0.94
ATP7AQ04656 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC20.94■□□□□ 0.94
ATP7AQ04656 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
ATP7AQ04656 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP7AQ04656 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC20.94■□□□□ 0.94
ATP7AQ04656 AC027612.2-202ENST00000445955 1199 ntBASIC20.94■□□□□ 0.94
ATP7AQ04656 VDAC1P11-201ENST00000458323 852 ntBASIC20.94■□□□□ 0.94
ATP7AQ04656 TPT1P11-201ENST00000458482 498 ntBASIC20.94■□□□□ 0.94
ATP7AQ04656 AC092612.1-201ENST00000514501 998 ntBASIC20.94■□□□□ 0.94
ATP7AQ04656 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATP7AQ04656 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC20.94■□□□□ 0.94
ATP7AQ04656 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC20.94■□□□□ 0.94
ATP7AQ04656 BAK1P2-201ENST00000532665 631 ntBASIC20.94■□□□□ 0.94
ATP7AQ04656 EMC4-208ENST00000559078 599 ntTSL 3 BASIC20.94■□□□□ 0.94
ATP7AQ04656 AC079414.2-201ENST00000567157 1104 ntBASIC20.94■□□□□ 0.94
ATP7AQ04656 HNRNPA1P16-201ENST00000575692 955 ntBASIC20.94■□□□□ 0.94
ATP7AQ04656 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC20.94■□□□□ 0.94
ATP7AQ04656 AC004686.1-201ENST00000605113 538 ntBASIC20.94■□□□□ 0.94
ATP7AQ04656 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC20.94■□□□□ 0.94
ATP7AQ04656 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP7AQ04656 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP7AQ04656 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP7AQ04656 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP7AQ04656 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
ATP7AQ04656 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATP7AQ04656 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP7AQ04656 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
ATP7AQ04656 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
ATP7AQ04656 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP7AQ04656 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP7AQ04656 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP7AQ04656 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
ATP7AQ04656 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP7AQ04656 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATP7AQ04656 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP7AQ04656 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP7AQ04656 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP7AQ04656 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC20.93■□□□□ 0.94
ATP7AQ04656 DKKL1P1-201ENST00000400550 698 ntBASIC20.93■□□□□ 0.94
ATP7AQ04656 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC20.93■□□□□ 0.94
ATP7AQ04656 AC103563.1-201ENST00000429316 123 ntBASIC20.93■□□□□ 0.94
ATP7AQ04656 AC023141.7-201ENST00000430646 407 ntBASIC20.93■□□□□ 0.94
ATP7AQ04656 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms