Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC17.03■□□□□ 0.32
RHBDL3P58872 AL021707.6-201ENST00000609212 491 ntBASIC17.03■□□□□ 0.32
RHBDL3P58872 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.03■□□□□ 0.32
RHBDL3P58872 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDL3P58872 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDL3P58872 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDL3P58872 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RHBDL3P58872 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
RHBDL3P58872 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDL3P58872 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDL3P58872 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
RHBDL3P58872 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDL3P58872 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDL3P58872 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC17.02■□□□□ 0.32
RHBDL3P58872 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
RHBDL3P58872 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RHBDL3P58872 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RHBDL3P58872 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC17.02■□□□□ 0.32
RHBDL3P58872 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RHBDL3P58872 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.02■□□□□ 0.32
RHBDL3P58872 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
RHBDL3P58872 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RHBDL3P58872 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RHBDL3P58872 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC17.02■□□□□ 0.32
RHBDL3P58872 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC17.02■□□□□ 0.32
RHBDL3P58872 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RHBDL3P58872 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RHBDL3P58872 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RHBDL3P58872 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
RHBDL3P58872 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC17.02■□□□□ 0.32
RHBDL3P58872 ERP29P1-201ENST00000442902 706 ntBASIC17.02■□□□□ 0.32
RHBDL3P58872 AL354861.1-201ENST00000445213 355 ntBASIC17.02■□□□□ 0.32
RHBDL3P58872 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC17.02■□□□□ 0.32
RHBDL3P58872 AC018638.5-201ENST00000450885 754 ntBASIC17.02■□□□□ 0.32
RHBDL3P58872 IGHV3-37-201ENST00000518544 340 ntBASIC17.02■□□□□ 0.32
RHBDL3P58872 NAA40-205ENST00000539656 577 ntTSL 4 BASIC17.02■□□□□ 0.32
RHBDL3P58872 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RHBDL3P58872 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RHBDL3P58872 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RHBDL3P58872 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RHBDL3P58872 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RHBDL3P58872 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RHBDL3P58872 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RHBDL3P58872 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.02■□□□□ 0.31
RHBDL3P58872 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
RHBDL3P58872 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC17.02■□□□□ 0.31
RHBDL3P58872 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RHBDL3P58872 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
RHBDL3P58872 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC17.01■□□□□ 0.31
RHBDL3P58872 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RHBDL3P58872 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RHBDL3P58872 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RHBDL3P58872 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
RHBDL3P58872 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RHBDL3P58872 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RHBDL3P58872 AC007952.5-201ENST00000572818 1486 ntBASIC17.01■□□□□ 0.31
RHBDL3P58872 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RHBDL3P58872 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RHBDL3P58872 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RHBDL3P58872 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RHBDL3P58872 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RHBDL3P58872 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RHBDL3P58872 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC17.01■□□□□ 0.31
RHBDL3P58872 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RHBDL3P58872 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC17.01■□□□□ 0.31
RHBDL3P58872 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC17.01■□□□□ 0.31
RHBDL3P58872 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC17.01■□□□□ 0.31
RHBDL3P58872 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC17.01■□□□□ 0.31
RHBDL3P58872 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC17.01■□□□□ 0.31
RHBDL3P58872 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RHBDL3P58872 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC17.01■□□□□ 0.31
RHBDL3P58872 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC17.01■□□□□ 0.31
RHBDL3P58872 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC17.01■□□□□ 0.31
RHBDL3P58872 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC17.01■□□□□ 0.31
RHBDL3P58872 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.01■□□□□ 0.31
RHBDL3P58872 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RHBDL3P58872 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RHBDL3P58872 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RHBDL3P58872 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RHBDL3P58872 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.01■□□□□ 0.31
RHBDL3P58872 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
RHBDL3P58872 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RHBDL3P58872 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RHBDL3P58872 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC17.01■□□□□ 0.31
RHBDL3P58872 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
RHBDL3P58872 FTX-216ENST00000638985 1367 ntTSL 5 BASIC17.01■□□□□ 0.31
RHBDL3P58872 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RHBDL3P58872 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RHBDL3P58872 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC17.01■□□□□ 0.31
RHBDL3P58872 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RHBDL3P58872 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17■□□□□ 0.31
RHBDL3P58872 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
RHBDL3P58872 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
RHBDL3P58872 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC17■□□□□ 0.31
RHBDL3P58872 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
RHBDL3P58872 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RHBDL3P58872 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RHBDL3P58872 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RHBDL3P58872 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC17■□□□□ 0.31
RHBDL3P58872 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms