Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
VSX2P58304 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
VSX2P58304 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VSX2P58304 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
VSX2P58304 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
VSX2P58304 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VSX2P58304 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VSX2P58304 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.04□□□□□ -0.16
VSX2P58304 AL354702.1-201ENST00000442006 1960 ntBASIC14.04□□□□□ -0.16
VSX2P58304 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.04□□□□□ -0.16
VSX2P58304 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VSX2P58304 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
VSX2P58304 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VSX2P58304 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VSX2P58304 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VSX2P58304 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.04□□□□□ -0.16
VSX2P58304 GPAA1P2-201ENST00000417923 928 ntBASIC14.04□□□□□ -0.16
VSX2P58304 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.04□□□□□ -0.16
VSX2P58304 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.04□□□□□ -0.16
VSX2P58304 FAM58BP-201ENST00000439056 645 ntBASIC14.04□□□□□ -0.16
VSX2P58304 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.04□□□□□ -0.16
VSX2P58304 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.04□□□□□ -0.16
VSX2P58304 SERPINA13P-202ENST00000478994 924 ntBASIC14.04□□□□□ -0.16
VSX2P58304 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.04□□□□□ -0.16
VSX2P58304 ZNF767P-206ENST00000513792 565 ntBASIC14.04□□□□□ -0.16
VSX2P58304 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.04□□□□□ -0.16
VSX2P58304 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.04□□□□□ -0.16
VSX2P58304 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.04□□□□□ -0.16
VSX2P58304 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
VSX2P58304 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
VSX2P58304 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.04□□□□□ -0.16
VSX2P58304 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VSX2P58304 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VSX2P58304 AL008718.2-201ENST00000609206 1313 ntBASIC14.04□□□□□ -0.16
VSX2P58304 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VSX2P58304 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.04□□□□□ -0.16
VSX2P58304 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
VSX2P58304 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VSX2P58304 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.04□□□□□ -0.16
VSX2P58304 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VSX2P58304 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.04□□□□□ -0.16
VSX2P58304 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
VSX2P58304 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VSX2P58304 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VSX2P58304 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.04□□□□□ -0.16
VSX2P58304 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.04□□□□□ -0.16
VSX2P58304 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
VSX2P58304 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
VSX2P58304 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VSX2P58304 AC139712.1-201ENST00000378256 1875 ntBASIC14.04□□□□□ -0.16
VSX2P58304 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.04□□□□□ -0.16
VSX2P58304 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
VSX2P58304 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VSX2P58304 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VSX2P58304 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VSX2P58304 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VSX2P58304 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
VSX2P58304 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VSX2P58304 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VSX2P58304 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VSX2P58304 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VSX2P58304 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
VSX2P58304 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.03□□□□□ -0.16
VSX2P58304 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VSX2P58304 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
VSX2P58304 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.03□□□□□ -0.16
VSX2P58304 AC005840.4-201ENST00000541242 2494 ntBASIC14.03□□□□□ -0.16
VSX2P58304 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
VSX2P58304 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
VSX2P58304 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
VSX2P58304 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VSX2P58304 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VSX2P58304 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VSX2P58304 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VSX2P58304 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VSX2P58304 AC012441.2-201ENST00000444843 739 ntBASIC14.03□□□□□ -0.16
VSX2P58304 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VSX2P58304 KRT8P13-201ENST00000463294 1010 ntBASIC14.03□□□□□ -0.16
VSX2P58304 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.03□□□□□ -0.16
VSX2P58304 AC044849.1-201ENST00000519737 1188 ntBASIC14.03□□□□□ -0.16
VSX2P58304 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VSX2P58304 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.03□□□□□ -0.16
VSX2P58304 AC103988.2-201ENST00000561804 725 ntBASIC14.03□□□□□ -0.16
VSX2P58304 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.03□□□□□ -0.16
VSX2P58304 MIR3615-201ENST00000581999 87 ntBASIC14.03□□□□□ -0.16
VSX2P58304 AC005962.1-201ENST00000584100 773 ntBASIC14.03□□□□□ -0.16
VSX2P58304 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VSX2P58304 AC009884.2-201ENST00000603110 324 ntBASIC14.03□□□□□ -0.16
VSX2P58304 AL451050.2-201ENST00000606967 682 ntBASIC14.03□□□□□ -0.16
VSX2P58304 MIR6787-201ENST00000616675 61 ntBASIC14.03□□□□□ -0.16
VSX2P58304 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.03□□□□□ -0.16
VSX2P58304 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
VSX2P58304 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VSX2P58304 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
VSX2P58304 AC004899.1-201ENST00000424687 1714 ntBASIC14.03□□□□□ -0.16
VSX2P58304 C8orf49-201ENST00000525043 1968 ntBASIC14.03□□□□□ -0.16
VSX2P58304 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
VSX2P58304 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
VSX2P58304 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VSX2P58304 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms