Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CAV3P56539 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CAV3P56539 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.15□□□□□ -0.3
CAV3P56539 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CAV3P56539 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CAV3P56539 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CAV3P56539 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.15□□□□□ -0.31
CAV3P56539 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.15□□□□□ -0.31
CAV3P56539 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
CAV3P56539 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.14□□□□□ -0.31
CAV3P56539 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.14□□□□□ -0.31
CAV3P56539 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CAV3P56539 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.14□□□□□ -0.31
CAV3P56539 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.14□□□□□ -0.31
CAV3P56539 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CAV3P56539 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.14□□□□□ -0.31
CAV3P56539 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CAV3P56539 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.14□□□□□ -0.31
CAV3P56539 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CAV3P56539 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CAV3P56539 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CAV3P56539 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CAV3P56539 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.14□□□□□ -0.31
CAV3P56539 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CAV3P56539 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CAV3P56539 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CAV3P56539 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CAV3P56539 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CAV3P56539 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CAV3P56539 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CAV3P56539 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CAV3P56539 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.14□□□□□ -0.31
CAV3P56539 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.14□□□□□ -0.31
CAV3P56539 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.14□□□□□ -0.31
CAV3P56539 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.14□□□□□ -0.31
CAV3P56539 INGX-202ENST00000489074 768 ntBASIC13.14□□□□□ -0.31
CAV3P56539 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.14□□□□□ -0.31
CAV3P56539 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.14□□□□□ -0.31
CAV3P56539 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CAV3P56539 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.14□□□□□ -0.31
CAV3P56539 AJ011932.1-201ENST00000621707 465 ntBASIC13.14□□□□□ -0.31
CAV3P56539 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CAV3P56539 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CAV3P56539 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CAV3P56539 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.14□□□□□ -0.31
CAV3P56539 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
CAV3P56539 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CAV3P56539 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CAV3P56539 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CAV3P56539 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CAV3P56539 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CAV3P56539 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
CAV3P56539 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
CAV3P56539 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.14□□□□□ -0.31
CAV3P56539 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CAV3P56539 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CAV3P56539 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CAV3P56539 AC072061.1-201ENST00000569710 2234 ntBASIC13.13□□□□□ -0.31
CAV3P56539 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CAV3P56539 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CAV3P56539 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CAV3P56539 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CAV3P56539 CR383656.2-201ENST00000548656 2254 ntBASIC13.13□□□□□ -0.31
CAV3P56539 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CAV3P56539 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CAV3P56539 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.13□□□□□ -0.31
CAV3P56539 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.13□□□□□ -0.31
CAV3P56539 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.13□□□□□ -0.31
CAV3P56539 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CAV3P56539 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CAV3P56539 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CAV3P56539 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CAV3P56539 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.13□□□□□ -0.31
CAV3P56539 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.13□□□□□ -0.31
CAV3P56539 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.13□□□□□ -0.31
CAV3P56539 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.13□□□□□ -0.31
CAV3P56539 AC114501.2-201ENST00000439631 535 ntBASIC13.13□□□□□ -0.31
CAV3P56539 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.13□□□□□ -0.31
CAV3P56539 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.13□□□□□ -0.31
CAV3P56539 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.13□□□□□ -0.31
CAV3P56539 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.13□□□□□ -0.31
CAV3P56539 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CAV3P56539 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.13□□□□□ -0.31
CAV3P56539 AL355385.1-201ENST00000606123 409 ntBASIC13.13□□□□□ -0.31
CAV3P56539 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.13□□□□□ -0.31
CAV3P56539 AL109936.8-201ENST00000641772 604 ntBASIC13.13□□□□□ -0.31
CAV3P56539 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CAV3P56539 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CAV3P56539 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CAV3P56539 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
CAV3P56539 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CAV3P56539 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CAV3P56539 PCDHB18P-202ENST00000526308 3197 ntBASIC13.13□□□□□ -0.31
CAV3P56539 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CAV3P56539 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CAV3P56539 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.13□□□□□ -0.31
CAV3P56539 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CAV3P56539 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CAV3P56539 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CAV3P56539 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms