Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC10.9□□□□□ -0.66
CMC4P56277 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC10.9□□□□□ -0.66
CMC4P56277 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC10.9□□□□□ -0.66
CMC4P56277 CSH2-202ENST00000345366 598 ntTSL 5 BASIC10.9□□□□□ -0.66
CMC4P56277 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC10.9□□□□□ -0.66
CMC4P56277 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC10.9□□□□□ -0.66
CMC4P56277 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC10.9□□□□□ -0.66
CMC4P56277 AP001258.2-201ENST00000529891 490 ntBASIC10.9□□□□□ -0.66
CMC4P56277 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 RNF41-210ENST00000552244 716 ntTSL 3 BASIC10.9□□□□□ -0.66
CMC4P56277 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
CMC4P56277 SYT17-208ENST00000568433 812 ntTSL 3 BASIC10.9□□□□□ -0.66
CMC4P56277 PRKN-211ENST00000615065 261 ntTSL 5 BASIC10.9□□□□□ -0.66
CMC4P56277 RPL35-206ENST00000629845 340 ntTSL 5 BASIC10.9□□□□□ -0.66
CMC4P56277 AC244452.3-201ENST00000636814 210 ntBASIC10.9□□□□□ -0.66
CMC4P56277 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC10.9□□□□□ -0.66
CMC4P56277 AC004923.1-202ENST00000642106 209 ntBASIC10.9□□□□□ -0.66
CMC4P56277 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC10.9□□□□□ -0.66
CMC4P56277 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC10.9□□□□□ -0.66
CMC4P56277 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC10.9□□□□□ -0.66
CMC4P56277 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC10.9□□□□□ -0.66
CMC4P56277 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CMC4P56277 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC10.9□□□□□ -0.66
CMC4P56277 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
CMC4P56277 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
CMC4P56277 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC10.9□□□□□ -0.67
CMC4P56277 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
CMC4P56277 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
CMC4P56277 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC10.9□□□□□ -0.67
CMC4P56277 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
CMC4P56277 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
CMC4P56277 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC10.9□□□□□ -0.67
CMC4P56277 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
CMC4P56277 KRT8P28-201ENST00000433288 1390 ntBASIC10.9□□□□□ -0.67
CMC4P56277 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CMC4P56277 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
CMC4P56277 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CMC4P56277 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CMC4P56277 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
CMC4P56277 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
CMC4P56277 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CMC4P56277 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CMC4P56277 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CMC4P56277 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CMC4P56277 GRN-222ENST00000639447 1314 ntTSL 2 BASIC10.89□□□□□ -0.67
CMC4P56277 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CMC4P56277 AC244394.1-201ENST00000435000 1665 ntBASIC10.89□□□□□ -0.67
CMC4P56277 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC10.89□□□□□ -0.67
CMC4P56277 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
CMC4P56277 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
CMC4P56277 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CMC4P56277 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CMC4P56277 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC10.89□□□□□ -0.67
CMC4P56277 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
CMC4P56277 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC10.89□□□□□ -0.67
CMC4P56277 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CMC4P56277 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC10.89□□□□□ -0.67
CMC4P56277 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CMC4P56277 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CMC4P56277 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CMC4P56277 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CMC4P56277 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
CMC4P56277 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CMC4P56277 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CMC4P56277 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CMC4P56277 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CMC4P56277 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CMC4P56277 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CMC4P56277 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC10.89□□□□□ -0.67
CMC4P56277 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CMC4P56277 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
CMC4P56277 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC10.89□□□□□ -0.67
CMC4P56277 AC104306.2-201ENST00000451877 341 ntBASIC10.89□□□□□ -0.67
CMC4P56277 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CMC4P56277 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC10.89□□□□□ -0.67
CMC4P56277 SERPINA13P-202ENST00000478994 924 ntBASIC10.89□□□□□ -0.67
CMC4P56277 ARTN-209ENST00000479128 471 ntTSL 3 BASIC10.89□□□□□ -0.67
CMC4P56277 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CMC4P56277 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC10.89□□□□□ -0.67
CMC4P56277 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC10.89□□□□□ -0.67
CMC4P56277 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CMC4P56277 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC10.89□□□□□ -0.67
CMC4P56277 CD74-212ENST00000524315 584 ntTSL 5 BASIC10.89□□□□□ -0.67
CMC4P56277 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC10.89□□□□□ -0.67
CMC4P56277 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC10.89□□□□□ -0.67
CMC4P56277 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC10.89□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms