Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC16.06■□□□□ 0.16
USP8P40818 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
USP8P40818 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
USP8P40818 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
USP8P40818 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC16.06■□□□□ 0.16
USP8P40818 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC16.06■□□□□ 0.16
USP8P40818 AC027601.5-201ENST00000624065 2482 ntBASIC16.06■□□□□ 0.16
USP8P40818 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
USP8P40818 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC16.06■□□□□ 0.16
USP8P40818 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC16.06■□□□□ 0.16
USP8P40818 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
USP8P40818 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
USP8P40818 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC16.06■□□□□ 0.16
USP8P40818 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
USP8P40818 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.06■□□□□ 0.16
USP8P40818 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
USP8P40818 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
USP8P40818 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
USP8P40818 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
USP8P40818 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.06■□□□□ 0.16
USP8P40818 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
USP8P40818 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.06■□□□□ 0.16
USP8P40818 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.06■□□□□ 0.16
USP8P40818 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
USP8P40818 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.06■□□□□ 0.16
USP8P40818 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
USP8P40818 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
USP8P40818 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
USP8P40818 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
USP8P40818 RPSAP52-203ENST00000622976 1023 ntBASIC16.06■□□□□ 0.16
USP8P40818 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.06■□□□□ 0.16
USP8P40818 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC16.06■□□□□ 0.16
USP8P40818 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
USP8P40818 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
USP8P40818 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
USP8P40818 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
USP8P40818 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
USP8P40818 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
USP8P40818 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
USP8P40818 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.06■□□□□ 0.16
USP8P40818 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
USP8P40818 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
USP8P40818 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
USP8P40818 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
USP8P40818 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
USP8P40818 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.05■□□□□ 0.16
USP8P40818 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC16.05■□□□□ 0.16
USP8P40818 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
USP8P40818 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
USP8P40818 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
USP8P40818 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
USP8P40818 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
USP8P40818 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
USP8P40818 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.05■□□□□ 0.16
USP8P40818 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
USP8P40818 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.05■□□□□ 0.16
USP8P40818 AC022447.6-201ENST00000515522 438 ntBASIC16.05■□□□□ 0.16
USP8P40818 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.05■□□□□ 0.16
USP8P40818 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
USP8P40818 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.05■□□□□ 0.16
USP8P40818 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.05■□□□□ 0.16
USP8P40818 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
USP8P40818 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.05■□□□□ 0.16
USP8P40818 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
USP8P40818 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
USP8P40818 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
USP8P40818 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
USP8P40818 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
USP8P40818 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
USP8P40818 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.05■□□□□ 0.16
USP8P40818 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
USP8P40818 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
USP8P40818 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16.05■□□□□ 0.16
USP8P40818 AC099521.3-201ENST00000624251 2938 ntBASIC16.05■□□□□ 0.16
USP8P40818 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC16.05■□□□□ 0.16
USP8P40818 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
USP8P40818 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.04■□□□□ 0.16
USP8P40818 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
USP8P40818 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
USP8P40818 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC16.04■□□□□ 0.16
USP8P40818 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC16.04■□□□□ 0.16
USP8P40818 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
USP8P40818 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
USP8P40818 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.04■□□□□ 0.16
USP8P40818 AL136172.1-201ENST00000598590 1394 ntBASIC16.04■□□□□ 0.16
USP8P40818 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC16.04■□□□□ 0.16
USP8P40818 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
USP8P40818 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.04■□□□□ 0.16
USP8P40818 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
USP8P40818 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
USP8P40818 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.04■□□□□ 0.16
USP8P40818 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
USP8P40818 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
USP8P40818 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
USP8P40818 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
USP8P40818 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.04■□□□□ 0.16
USP8P40818 AL355864.2-201ENST00000447420 863 ntBASIC16.04■□□□□ 0.16
USP8P40818 AC007389.4-201ENST00000454674 793 ntBASIC16.04■□□□□ 0.16
USP8P40818 INE1-201ENST00000456273 945 ntBASIC16.04■□□□□ 0.16
USP8P40818 AC106760.1-201ENST00000508690 800 ntBASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms