Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 RN7SL375P-201ENST00000492442 298 ntBASIC18.1■□□□□ 0.49
RFC4P35249 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC18.1■□□□□ 0.49
RFC4P35249 OR2A1-AS1-210ENST00000496968 531 ntBASIC18.1■□□□□ 0.49
RFC4P35249 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC18.1■□□□□ 0.49
RFC4P35249 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC18.1■□□□□ 0.49
RFC4P35249 AC090136.2-201ENST00000517809 420 ntBASIC18.1■□□□□ 0.49
RFC4P35249 AC005586.2-201ENST00000563946 837 ntBASIC18.1■□□□□ 0.49
RFC4P35249 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RFC4P35249 SNORD3B-1-201ENST00000577988 758 ntBASIC18.1■□□□□ 0.49
RFC4P35249 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC18.1■□□□□ 0.49
RFC4P35249 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
RFC4P35249 RPS5-204ENST00000598098 536 ntTSL 2 BASIC18.1■□□□□ 0.49
RFC4P35249 AC008972.2-201ENST00000606587 494 ntBASIC18.1■□□□□ 0.49
RFC4P35249 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC18.1■□□□□ 0.49
RFC4P35249 AL359091.4-201ENST00000610052 409 ntBASIC18.1■□□□□ 0.49
RFC4P35249 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RFC4P35249 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC4P35249 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC4P35249 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC4P35249 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC4P35249 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC4P35249 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RFC4P35249 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
RFC4P35249 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC4P35249 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RFC4P35249 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC4P35249 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC4P35249 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC18.09■□□□□ 0.49
RFC4P35249 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.09■□□□□ 0.49
RFC4P35249 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC4P35249 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
RFC4P35249 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC4P35249 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC18.09■□□□□ 0.49
RFC4P35249 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC4P35249 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC18.09■□□□□ 0.49
RFC4P35249 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC4P35249 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC4P35249 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFC4P35249 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RFC4P35249 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFC4P35249 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFC4P35249 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC4P35249 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC4P35249 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC4P35249 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFC4P35249 PPP1R2P4-201ENST00000424051 595 ntBASIC18.09■□□□□ 0.49
RFC4P35249 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFC4P35249 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC4P35249 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC18.09■□□□□ 0.49
RFC4P35249 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC18.09■□□□□ 0.49
RFC4P35249 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC18.09■□□□□ 0.49
RFC4P35249 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC4P35249 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC4P35249 VENTXP3-201ENST00000546480 773 ntBASIC18.09■□□□□ 0.49
RFC4P35249 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC18.09■□□□□ 0.49
RFC4P35249 AC013553.1-201ENST00000560906 267 ntBASIC18.09■□□□□ 0.49
RFC4P35249 ABHD17AP9-201ENST00000561925 548 ntBASIC18.09■□□□□ 0.49
RFC4P35249 CYP4F36P-201ENST00000589193 186 ntBASIC18.09■□□□□ 0.49
RFC4P35249 AP005264.5-201ENST00000590066 467 ntBASIC18.09■□□□□ 0.49
RFC4P35249 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC18.09■□□□□ 0.49
RFC4P35249 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFC4P35249 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.09■□□□□ 0.49
RFC4P35249 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC4P35249 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.09■□□□□ 0.49
RFC4P35249 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC18.09■□□□□ 0.49
RFC4P35249 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.09■□□□□ 0.49
RFC4P35249 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC18.09■□□□□ 0.49
RFC4P35249 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC4P35249 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
RFC4P35249 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RFC4P35249 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RFC4P35249 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RFC4P35249 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
RFC4P35249 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RFC4P35249 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.08■□□□□ 0.49
RFC4P35249 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RFC4P35249 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RFC4P35249 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
RFC4P35249 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RFC4P35249 MSANTD2P1-201ENST00000445341 1368 ntBASIC18.08■□□□□ 0.49
RFC4P35249 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RFC4P35249 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RFC4P35249 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RFC4P35249 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
RFC4P35249 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RFC4P35249 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.08■□□□□ 0.48
RFC4P35249 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFC4P35249 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC18.08■□□□□ 0.48
RFC4P35249 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC18.08■□□□□ 0.48
RFC4P35249 CISD2-202ENST00000503643 808 ntTSL 2 BASIC18.08■□□□□ 0.48
RFC4P35249 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RFC4P35249 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
RFC4P35249 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
RFC4P35249 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC18.08■□□□□ 0.48
RFC4P35249 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RFC4P35249 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC18.08■□□□□ 0.48
RFC4P35249 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC18.08■□□□□ 0.48
RFC4P35249 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RFC4P35249 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
RFC4P35249 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms