Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RN7SL832P-201ENST00000607781 1756 ntBASIC14.94□□□□□ -0.02
SLC6A4P31645 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC6A4P31645 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A4P31645 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A4P31645 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A4P31645 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A4P31645 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.94□□□□□ -0.02
SLC6A4P31645 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC6A4P31645 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC6A4P31645 NUP210P1-202ENST00000504322 710 ntBASIC14.94□□□□□ -0.02
SLC6A4P31645 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC6A4P31645 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.94□□□□□ -0.02
SLC6A4P31645 MEG3_2.1-201ENST00000611456 105 ntBASIC14.94□□□□□ -0.02
SLC6A4P31645 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC6A4P31645 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.94□□□□□ -0.02
SLC6A4P31645 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A4P31645 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.94□□□□□ -0.02
SLC6A4P31645 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A4P31645 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A4P31645 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A4P31645 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A4P31645 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A4P31645 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A4P31645 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A4P31645 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A4P31645 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A4P31645 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A4P31645 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A4P31645 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC6A4P31645 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A4P31645 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SLC6A4P31645 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A4P31645 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC6A4P31645 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A4P31645 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC6A4P31645 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC6A4P31645 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A4P31645 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A4P31645 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC6A4P31645 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.93□□□□□ -0.02
SLC6A4P31645 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SLC6A4P31645 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SLC6A4P31645 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A4P31645 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC6A4P31645 AC015802.1-201ENST00000588104 1449 ntBASIC14.93□□□□□ -0.02
SLC6A4P31645 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.93□□□□□ -0.02
SLC6A4P31645 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A4P31645 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC6A4P31645 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC6A4P31645 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.93□□□□□ -0.02
SLC6A4P31645 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A4P31645 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SLC6A4P31645 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.93□□□□□ -0.02
SLC6A4P31645 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.93□□□□□ -0.02
SLC6A4P31645 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A4P31645 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A4P31645 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A4P31645 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A4P31645 PDIA3P2-201ENST00000428073 158 ntBASIC14.93□□□□□ -0.02
SLC6A4P31645 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC6A4P31645 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.93□□□□□ -0.02
SLC6A4P31645 AC073150.1-201ENST00000450406 1084 ntBASIC14.93□□□□□ -0.02
SLC6A4P31645 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A4P31645 AL161670.2-201ENST00000557650 1227 ntBASIC14.93□□□□□ -0.02
SLC6A4P31645 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.93□□□□□ -0.02
SLC6A4P31645 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.93□□□□□ -0.02
SLC6A4P31645 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.93□□□□□ -0.02
SLC6A4P31645 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.93□□□□□ -0.02
SLC6A4P31645 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.93□□□□□ -0.02
SLC6A4P31645 AC091812.3-201ENST00000621362 345 ntBASIC14.93□□□□□ -0.02
SLC6A4P31645 CU633904.3-201ENST00000624042 1029 ntBASIC14.93□□□□□ -0.02
SLC6A4P31645 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
SLC6A4P31645 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SLC6A4P31645 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A4P31645 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A4P31645 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A4P31645 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A4P31645 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC6A4P31645 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.93□□□□□ -0.02
SLC6A4P31645 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A4P31645 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A4P31645 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.93□□□□□ -0.02
SLC6A4P31645 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SLC6A4P31645 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A4P31645 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A4P31645 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A4P31645 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.93□□□□□ -0.02
SLC6A4P31645 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A4P31645 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC6A4P31645 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC6A4P31645 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SLC6A4P31645 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A4P31645 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC6A4P31645 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC6A4P31645 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
SLC6A4P31645 AC099063.4-201ENST00000641099 1602 ntBASIC14.92□□□□□ -0.02
SLC6A4P31645 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC6A4P31645 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC6A4P31645 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC6A4P31645 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms