Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CPS1P31327 HNRNPA1P56-201ENST00000505767 954 ntBASIC20■□□□□ 0.79
CPS1P31327 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC20■□□□□ 0.79
CPS1P31327 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC20■□□□□ 0.79
CPS1P31327 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC20■□□□□ 0.79
CPS1P31327 CLPP-205ENST00000596605 646 ntTSL 2 BASIC20■□□□□ 0.79
CPS1P31327 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC20■□□□□ 0.79
CPS1P31327 HPX-213ENST00000615166 826 ntTSL 5 BASIC20■□□□□ 0.79
CPS1P31327 AC010531.8-201ENST00000623341 685 ntBASIC20■□□□□ 0.79
CPS1P31327 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC20■□□□□ 0.79
CPS1P31327 PAUPAR-201ENST00000630360 2965 ntBASIC20■□□□□ 0.79
CPS1P31327 AL354702.1-201ENST00000442006 1960 ntBASIC20■□□□□ 0.79
CPS1P31327 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CPS1P31327 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC20■□□□□ 0.79
CPS1P31327 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC20■□□□□ 0.79
CPS1P31327 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.99■□□□□ 0.79
CPS1P31327 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPS1P31327 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CPS1P31327 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPS1P31327 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPS1P31327 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC19.99■□□□□ 0.79
CPS1P31327 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC19.99■□□□□ 0.79
CPS1P31327 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC19.99■□□□□ 0.79
CPS1P31327 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CPS1P31327 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC19.99■□□□□ 0.79
CPS1P31327 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPS1P31327 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPS1P31327 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPS1P31327 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPS1P31327 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CPS1P31327 BX679664.3-201ENST00000414070 555 ntBASIC19.99■□□□□ 0.79
CPS1P31327 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CPS1P31327 POLR2LP1-206ENST00000444785 187 ntBASIC19.99■□□□□ 0.79
CPS1P31327 AC113935.1-201ENST00000471722 555 ntBASIC19.99■□□□□ 0.79
CPS1P31327 MBP-230ENST00000528160 584 ntTSL 5 BASIC19.99■□□□□ 0.79
CPS1P31327 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC19.99■□□□□ 0.79
CPS1P31327 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC19.99■□□□□ 0.79
CPS1P31327 AC021321.1-201ENST00000607397 1113 ntBASIC19.99■□□□□ 0.79
CPS1P31327 AC048382.6-201ENST00000621980 1223 ntBASIC19.99■□□□□ 0.79
CPS1P31327 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC19.99■□□□□ 0.79
CPS1P31327 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPS1P31327 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPS1P31327 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPS1P31327 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPS1P31327 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC19.99■□□□□ 0.79
CPS1P31327 AC013268.4-201ENST00000637413 2228 ntBASIC19.99■□□□□ 0.79
CPS1P31327 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPS1P31327 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPS1P31327 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CPS1P31327 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
CPS1P31327 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPS1P31327 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPS1P31327 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC19.98■□□□□ 0.79
CPS1P31327 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CPS1P31327 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPS1P31327 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPS1P31327 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CPS1P31327 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC19.98■□□□□ 0.79
CPS1P31327 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPS1P31327 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC19.98■□□□□ 0.79
CPS1P31327 SAP18P2-201ENST00000434334 459 ntBASIC19.98■□□□□ 0.79
CPS1P31327 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC19.98■□□□□ 0.79
CPS1P31327 NALT1-202ENST00000450304 437 ntTSL 3 BASIC19.98■□□□□ 0.79
CPS1P31327 TMA16-204ENST00000508268 608 ntTSL 2 BASIC19.98■□□□□ 0.79
CPS1P31327 AC005740.1-201ENST00000515639 522 ntBASIC19.98■□□□□ 0.79
CPS1P31327 ABCC6P1-203ENST00000565566 1170 ntBASIC19.98■□□□□ 0.79
CPS1P31327 AC126755.5-201ENST00000622756 267 ntBASIC19.98■□□□□ 0.79
CPS1P31327 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
CPS1P31327 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPS1P31327 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPS1P31327 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPS1P31327 AGAP7P-201ENST00000582299 2062 ntBASIC19.98■□□□□ 0.79
CPS1P31327 AGAP14-201ENST00000624701 2060 ntBASIC19.98■□□□□ 0.79
CPS1P31327 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC19.98■□□□□ 0.79
CPS1P31327 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC19.98■□□□□ 0.79
CPS1P31327 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CPS1P31327 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPS1P31327 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC19.98■□□□□ 0.79
CPS1P31327 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CPS1P31327 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPS1P31327 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CPS1P31327 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC19.97■□□□□ 0.79
CPS1P31327 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CPS1P31327 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CPS1P31327 AC093300.1-201ENST00000510368 1201 ntBASIC19.97■□□□□ 0.79
CPS1P31327 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC19.97■□□□□ 0.79
CPS1P31327 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC19.97■□□□□ 0.79
CPS1P31327 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC19.97■□□□□ 0.79
CPS1P31327 AC132812.1-201ENST00000583145 892 ntBASIC19.97■□□□□ 0.79
CPS1P31327 AP001462.1-201ENST00000594089 452 ntBASIC19.97■□□□□ 0.79
CPS1P31327 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC19.97■□□□□ 0.79
CPS1P31327 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC19.97■□□□□ 0.79
CPS1P31327 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPS1P31327 KRT8P18-201ENST00000413425 1445 ntBASIC19.97■□□□□ 0.79
CPS1P31327 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPS1P31327 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPS1P31327 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPS1P31327 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC19.97■□□□□ 0.79
CPS1P31327 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPS1P31327 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms