Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CD40LGP29965 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
CD40LGP29965 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
CD40LGP29965 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD40LGP29965 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD40LGP29965 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD40LGP29965 MCCD1P2-201ENST00000423228 335 ntBASIC13.02□□□□□ -0.33
CD40LGP29965 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.02□□□□□ -0.33
CD40LGP29965 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.02□□□□□ -0.33
CD40LGP29965 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.02□□□□□ -0.33
CD40LGP29965 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
CD40LGP29965 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.02□□□□□ -0.33
CD40LGP29965 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.02□□□□□ -0.33
CD40LGP29965 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.02□□□□□ -0.33
CD40LGP29965 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.02□□□□□ -0.33
CD40LGP29965 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CD40LGP29965 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.02□□□□□ -0.33
CD40LGP29965 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.02□□□□□ -0.33
CD40LGP29965 AC025181.2-201ENST00000606994 802 ntBASIC13.02□□□□□ -0.33
CD40LGP29965 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CD40LGP29965 C20orf181-201ENST00000623918 480 ntBASIC13.02□□□□□ -0.33
CD40LGP29965 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD40LGP29965 AL360270.3-201ENST00000609118 1348 ntBASIC13.02□□□□□ -0.33
CD40LGP29965 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD40LGP29965 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CD40LGP29965 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD40LGP29965 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
CD40LGP29965 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
CD40LGP29965 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CD40LGP29965 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD40LGP29965 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.02□□□□□ -0.33
CD40LGP29965 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.02□□□□□ -0.33
CD40LGP29965 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CD40LGP29965 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD40LGP29965 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD40LGP29965 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC13.02□□□□□ -0.33
CD40LGP29965 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CD40LGP29965 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.02□□□□□ -0.33
CD40LGP29965 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD40LGP29965 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CD40LGP29965 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
CD40LGP29965 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CD40LGP29965 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CD40LGP29965 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CD40LGP29965 LINC00567-201ENST00000569854 3409 ntBASIC13.01□□□□□ -0.33
CD40LGP29965 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CD40LGP29965 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40LGP29965 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40LGP29965 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40LGP29965 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CD40LGP29965 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40LGP29965 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC13.01□□□□□ -0.33
CD40LGP29965 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CD40LGP29965 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.01□□□□□ -0.33
CD40LGP29965 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC13.01□□□□□ -0.33
CD40LGP29965 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CD40LGP29965 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40LGP29965 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40LGP29965 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC13.01□□□□□ -0.33
CD40LGP29965 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.01□□□□□ -0.33
CD40LGP29965 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40LGP29965 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CD40LGP29965 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
CD40LGP29965 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CD40LGP29965 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40LGP29965 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40LGP29965 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40LGP29965 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
CD40LGP29965 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CD40LGP29965 BX842568.4-201ENST00000421222 227 ntBASIC13.01□□□□□ -0.33
CD40LGP29965 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.01□□□□□ -0.33
CD40LGP29965 MKNK2P1-201ENST00000437526 628 ntBASIC13.01□□□□□ -0.33
CD40LGP29965 RN7SL589P-201ENST00000481268 310 ntBASIC13.01□□□□□ -0.33
CD40LGP29965 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.01□□□□□ -0.33
CD40LGP29965 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.01□□□□□ -0.33
CD40LGP29965 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.01□□□□□ -0.33
CD40LGP29965 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40LGP29965 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.01□□□□□ -0.33
CD40LGP29965 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.01□□□□□ -0.33
CD40LGP29965 AC092865.5-201ENST00000545435 363 ntBASIC13.01□□□□□ -0.33
CD40LGP29965 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.01□□□□□ -0.33
CD40LGP29965 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40LGP29965 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.01□□□□□ -0.33
CD40LGP29965 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.01□□□□□ -0.33
CD40LGP29965 AL513190.1-201ENST00000621254 727 ntBASIC13.01□□□□□ -0.33
CD40LGP29965 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40LGP29965 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40LGP29965 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40LGP29965 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CD40LGP29965 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CD40LGP29965 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40LGP29965 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40LGP29965 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.01□□□□□ -0.33
CD40LGP29965 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC13.01□□□□□ -0.33
CD40LGP29965 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40LGP29965 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.01□□□□□ -0.33
CD40LGP29965 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC13.01□□□□□ -0.33
CD40LGP29965 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40LGP29965 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD40LGP29965 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms