Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.52□□□□□ -0.08
VARSP26640 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VARSP26640 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
VARSP26640 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VARSP26640 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
VARSP26640 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VARSP26640 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VARSP26640 AC020907.1-201ENST00000616460 1350 ntBASIC14.52□□□□□ -0.08
VARSP26640 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
VARSP26640 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.52□□□□□ -0.08
VARSP26640 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
VARSP26640 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.52□□□□□ -0.08
VARSP26640 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VARSP26640 AC067750.1-201ENST00000608826 6545 ntBASIC14.52□□□□□ -0.08
VARSP26640 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
VARSP26640 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
VARSP26640 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VARSP26640 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VARSP26640 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
VARSP26640 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.52□□□□□ -0.09
VARSP26640 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
VARSP26640 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
VARSP26640 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC14.52□□□□□ -0.09
VARSP26640 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.52□□□□□ -0.09
VARSP26640 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.52□□□□□ -0.09
VARSP26640 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.52□□□□□ -0.09
VARSP26640 TPT1P11-201ENST00000458482 498 ntBASIC14.52□□□□□ -0.09
VARSP26640 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
VARSP26640 USP32P1-208ENST00000506594 1164 ntBASIC14.52□□□□□ -0.09
VARSP26640 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.52□□□□□ -0.09
VARSP26640 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.52□□□□□ -0.09
VARSP26640 AC068587.3-201ENST00000526613 355 ntBASIC14.52□□□□□ -0.09
VARSP26640 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VARSP26640 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VARSP26640 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.52□□□□□ -0.09
VARSP26640 AC145423.3-201ENST00000615987 467 ntBASIC14.52□□□□□ -0.09
VARSP26640 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
VARSP26640 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VARSP26640 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.52□□□□□ -0.09
VARSP26640 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VARSP26640 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VARSP26640 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
VARSP26640 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.52□□□□□ -0.09
VARSP26640 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VARSP26640 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VARSP26640 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
VARSP26640 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VARSP26640 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
VARSP26640 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.52□□□□□ -0.09
VARSP26640 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.52□□□□□ -0.09
VARSP26640 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
VARSP26640 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VARSP26640 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VARSP26640 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VARSP26640 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.51□□□□□ -0.09
VARSP26640 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VARSP26640 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VARSP26640 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VARSP26640 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VARSP26640 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VARSP26640 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VARSP26640 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.51□□□□□ -0.09
VARSP26640 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VARSP26640 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
VARSP26640 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.51□□□□□ -0.09
VARSP26640 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VARSP26640 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VARSP26640 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
VARSP26640 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
VARSP26640 AC092135.3-201ENST00000624151 1846 ntBASIC14.51□□□□□ -0.09
VARSP26640 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
VARSP26640 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VARSP26640 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VARSP26640 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VARSP26640 AC005229.1-201ENST00000392885 409 ntBASIC14.51□□□□□ -0.09
VARSP26640 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VARSP26640 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.51□□□□□ -0.09
VARSP26640 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.51□□□□□ -0.09
VARSP26640 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.51□□□□□ -0.09
VARSP26640 BNIP3P42-201ENST00000454982 569 ntBASIC14.51□□□□□ -0.09
VARSP26640 CTBP2P5-201ENST00000454986 1264 ntBASIC14.51□□□□□ -0.09
VARSP26640 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VARSP26640 AC106760.1-201ENST00000508690 800 ntBASIC14.51□□□□□ -0.09
VARSP26640 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.51□□□□□ -0.09
VARSP26640 AL583810.1-201ENST00000553344 1045 ntBASIC14.51□□□□□ -0.09
VARSP26640 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VARSP26640 BNIP3P29-201ENST00000598302 571 ntBASIC14.51□□□□□ -0.09
VARSP26640 AC011447.5-201ENST00000616168 564 ntBASIC14.51□□□□□ -0.09
VARSP26640 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.51□□□□□ -0.09
VARSP26640 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VARSP26640 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
VARSP26640 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
VARSP26640 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VARSP26640 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
VARSP26640 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VARSP26640 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VARSP26640 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
VARSP26640 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.51□□□□□ -0.09
VARSP26640 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.51□□□□□ -0.09
VARSP26640 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms