Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NR4A1P22736 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.71□□□□□ -0.21
NR4A1P22736 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.71□□□□□ -0.21
NR4A1P22736 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NR4A1P22736 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NR4A1P22736 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NR4A1P22736 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
NR4A1P22736 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
NR4A1P22736 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NR4A1P22736 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC13.71□□□□□ -0.21
NR4A1P22736 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.71□□□□□ -0.21
NR4A1P22736 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
NR4A1P22736 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.71□□□□□ -0.21
NR4A1P22736 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.71□□□□□ -0.21
NR4A1P22736 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
NR4A1P22736 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NR4A1P22736 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
NR4A1P22736 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.71□□□□□ -0.21
NR4A1P22736 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
NR4A1P22736 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.71□□□□□ -0.21
NR4A1P22736 MIR661-201ENST00000384842 89 ntBASIC13.71□□□□□ -0.21
NR4A1P22736 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NR4A1P22736 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.71□□□□□ -0.21
NR4A1P22736 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.71□□□□□ -0.21
NR4A1P22736 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.71□□□□□ -0.21
NR4A1P22736 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.71□□□□□ -0.21
NR4A1P22736 TERF1P3-201ENST00000505638 1227 ntBASIC13.71□□□□□ -0.21
NR4A1P22736 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.71□□□□□ -0.21
NR4A1P22736 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NR4A1P22736 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
NR4A1P22736 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
NR4A1P22736 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NR4A1P22736 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
NR4A1P22736 AC004461.2-201ENST00000629517 803 ntBASIC13.71□□□□□ -0.21
NR4A1P22736 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.71□□□□□ -0.21
NR4A1P22736 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.71□□□□□ -0.21
NR4A1P22736 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NR4A1P22736 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.71□□□□□ -0.21
NR4A1P22736 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NR4A1P22736 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NR4A1P22736 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC13.71□□□□□ -0.22
NR4A1P22736 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
NR4A1P22736 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
NR4A1P22736 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NR4A1P22736 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
NR4A1P22736 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
NR4A1P22736 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NR4A1P22736 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.71□□□□□ -0.22
NR4A1P22736 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
NR4A1P22736 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
NR4A1P22736 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NR4A1P22736 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
NR4A1P22736 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.71□□□□□ -0.22
NR4A1P22736 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
NR4A1P22736 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NR4A1P22736 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC13.7□□□□□ -0.22
NR4A1P22736 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
NR4A1P22736 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC13.7□□□□□ -0.22
NR4A1P22736 AL731571.1-201ENST00000617058 5428 ntBASIC13.7□□□□□ -0.22
NR4A1P22736 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.7□□□□□ -0.22
NR4A1P22736 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NR4A1P22736 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NR4A1P22736 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NR4A1P22736 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
NR4A1P22736 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NR4A1P22736 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NR4A1P22736 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
NR4A1P22736 INE2-201ENST00000630399 1874 ntBASIC13.7□□□□□ -0.22
NR4A1P22736 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NR4A1P22736 BEND3P3-201ENST00000611030 2440 ntBASIC13.7□□□□□ -0.22
NR4A1P22736 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
NR4A1P22736 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.7□□□□□ -0.22
NR4A1P22736 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.7□□□□□ -0.22
NR4A1P22736 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NR4A1P22736 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NR4A1P22736 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.7□□□□□ -0.22
NR4A1P22736 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.7□□□□□ -0.22
NR4A1P22736 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.7□□□□□ -0.22
NR4A1P22736 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.7□□□□□ -0.22
NR4A1P22736 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.7□□□□□ -0.22
NR4A1P22736 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.7□□□□□ -0.22
NR4A1P22736 TMEM198B-204ENST00000484016 896 ntBASIC13.7□□□□□ -0.22
NR4A1P22736 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.7□□□□□ -0.22
NR4A1P22736 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
NR4A1P22736 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NR4A1P22736 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.7□□□□□ -0.22
NR4A1P22736 AC138761.1-201ENST00000584393 385 ntBASIC13.7□□□□□ -0.22
NR4A1P22736 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
NR4A1P22736 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.7□□□□□ -0.22
NR4A1P22736 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.7□□□□□ -0.22
NR4A1P22736 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.7□□□□□ -0.22
NR4A1P22736 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NR4A1P22736 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.7□□□□□ -0.22
NR4A1P22736 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.7□□□□□ -0.22
NR4A1P22736 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.7□□□□□ -0.22
NR4A1P22736 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NR4A1P22736 AL354702.1-201ENST00000442006 1960 ntBASIC13.7□□□□□ -0.22
NR4A1P22736 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NR4A1P22736 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NR4A1P22736 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms