Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MSR1P21757 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MSR1P21757 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
MSR1P21757 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.97□□□□□ -0.33
MSR1P21757 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MSR1P21757 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.97□□□□□ -0.33
MSR1P21757 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
MSR1P21757 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MSR1P21757 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MSR1P21757 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
MSR1P21757 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
MSR1P21757 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
MSR1P21757 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
MSR1P21757 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MSR1P21757 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
MSR1P21757 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.97□□□□□ -0.33
MSR1P21757 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MSR1P21757 AHCYP2-201ENST00000430630 1300 ntBASIC12.97□□□□□ -0.33
MSR1P21757 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MSR1P21757 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.97□□□□□ -0.33
MSR1P21757 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MSR1P21757 AC006504.5-208ENST00000588784 2401 ntBASIC12.97□□□□□ -0.33
MSR1P21757 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MSR1P21757 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
MSR1P21757 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MSR1P21757 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.97□□□□□ -0.33
MSR1P21757 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
MSR1P21757 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
MSR1P21757 MIR1202-201ENST00000408529 83 ntBASIC12.97□□□□□ -0.33
MSR1P21757 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
MSR1P21757 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.97□□□□□ -0.33
MSR1P21757 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MSR1P21757 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC12.97□□□□□ -0.33
MSR1P21757 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MSR1P21757 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.97□□□□□ -0.33
MSR1P21757 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.97□□□□□ -0.33
MSR1P21757 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC12.97□□□□□ -0.33
MSR1P21757 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MSR1P21757 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.97□□□□□ -0.33
MSR1P21757 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MSR1P21757 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.97□□□□□ -0.33
MSR1P21757 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC12.97□□□□□ -0.33
MSR1P21757 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.97□□□□□ -0.33
MSR1P21757 MIR4683-201ENST00000579659 81 ntBASIC12.97□□□□□ -0.33
MSR1P21757 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC12.97□□□□□ -0.33
MSR1P21757 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.97□□□□□ -0.33
MSR1P21757 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MSR1P21757 AC073413.1-201ENST00000603927 732 ntBASIC12.97□□□□□ -0.33
MSR1P21757 LINC02084-201ENST00000606069 1096 ntBASIC12.97□□□□□ -0.33
MSR1P21757 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.97□□□□□ -0.33
MSR1P21757 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.97□□□□□ -0.33
MSR1P21757 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
MSR1P21757 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MSR1P21757 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MSR1P21757 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
MSR1P21757 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MSR1P21757 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.97□□□□□ -0.33
MSR1P21757 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
MSR1P21757 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.97□□□□□ -0.33
MSR1P21757 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MSR1P21757 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
MSR1P21757 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MSR1P21757 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.97□□□□□ -0.33
MSR1P21757 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
MSR1P21757 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MSR1P21757 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
MSR1P21757 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
MSR1P21757 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.97□□□□□ -0.33
MSR1P21757 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MSR1P21757 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.97□□□□□ -0.33
MSR1P21757 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MSR1P21757 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MSR1P21757 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
MSR1P21757 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.96□□□□□ -0.33
MSR1P21757 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
MSR1P21757 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MSR1P21757 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
MSR1P21757 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
MSR1P21757 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
MSR1P21757 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
MSR1P21757 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MSR1P21757 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MSR1P21757 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.96□□□□□ -0.33
MSR1P21757 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MSR1P21757 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.96□□□□□ -0.33
MSR1P21757 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MSR1P21757 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MSR1P21757 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.96□□□□□ -0.33
MSR1P21757 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
MSR1P21757 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MSR1P21757 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
MSR1P21757 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MSR1P21757 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MSR1P21757 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.96□□□□□ -0.33
MSR1P21757 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
MSR1P21757 AC112492.5-201ENST00000421897 457 ntBASIC12.96□□□□□ -0.33
MSR1P21757 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.96□□□□□ -0.33
MSR1P21757 RPL7P3-201ENST00000441388 714 ntBASIC12.96□□□□□ -0.33
MSR1P21757 AC234783.1-201ENST00000441761 496 ntBASIC12.96□□□□□ -0.33
MSR1P21757 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms