Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC132192.2-201ENST00000596206 1147 ntBASIC14.79□□□□□ -0.04
HLA-DPA1P20036 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DPA1P20036 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 AC119751.2-201ENST00000504529 210 ntBASIC14.78□□□□□ -0.04
HLA-DPA1P20036 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 DUX4L46-201ENST00000566845 751 ntBASIC14.78□□□□□ -0.04
HLA-DPA1P20036 EEF1DP1-201ENST00000585891 896 ntBASIC14.78□□□□□ -0.04
HLA-DPA1P20036 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 AC244157.2-201ENST00000616239 1006 ntBASIC14.78□□□□□ -0.04
HLA-DPA1P20036 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.78□□□□□ -0.04
HLA-DPA1P20036 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DPA1P20036 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DPA1P20036 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC14.77□□□□□ -0.04
HLA-DPA1P20036 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DPA1P20036 AC027601.5-201ENST00000624065 2482 ntBASIC14.77□□□□□ -0.04
HLA-DPA1P20036 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DPA1P20036 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DPA1P20036 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DPA1P20036 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DPA1P20036 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
HLA-DPA1P20036 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DPA1P20036 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
HLA-DPA1P20036 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.77□□□□□ -0.04
HLA-DPA1P20036 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DPA1P20036 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DPA1P20036 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.77□□□□□ -0.04
HLA-DPA1P20036 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
HLA-DPA1P20036 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DPA1P20036 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DPA1P20036 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DPA1P20036 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.77□□□□□ -0.04
HLA-DPA1P20036 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DPA1P20036 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.77□□□□□ -0.04
HLA-DPA1P20036 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
HLA-DPA1P20036 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.77□□□□□ -0.04
HLA-DPA1P20036 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.77□□□□□ -0.04
HLA-DPA1P20036 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
HLA-DPA1P20036 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
HLA-DPA1P20036 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DPA1P20036 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms