Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP2A2P16615 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
ATP2A2P16615 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATP2A2P16615 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
ATP2A2P16615 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP2A2P16615 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.23■□□□□ 0.19
ATP2A2P16615 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP2A2P16615 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP2A2P16615 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.23■□□□□ 0.19
ATP2A2P16615 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP2A2P16615 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP2A2P16615 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP2A2P16615 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.23■□□□□ 0.19
ATP2A2P16615 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC16.23■□□□□ 0.19
ATP2A2P16615 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP2A2P16615 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.23■□□□□ 0.19
ATP2A2P16615 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP2A2P16615 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATP2A2P16615 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
ATP2A2P16615 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.23■□□□□ 0.19
ATP2A2P16615 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.23■□□□□ 0.19
ATP2A2P16615 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.23■□□□□ 0.19
ATP2A2P16615 AC025271.4-201ENST00000621477 1726 ntBASIC16.23■□□□□ 0.19
ATP2A2P16615 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATP2A2P16615 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATP2A2P16615 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.23■□□□□ 0.19
ATP2A2P16615 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP2A2P16615 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP2A2P16615 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
ATP2A2P16615 AC012441.2-201ENST00000444843 739 ntBASIC16.23■□□□□ 0.19
ATP2A2P16615 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.23■□□□□ 0.19
ATP2A2P16615 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.23■□□□□ 0.19
ATP2A2P16615 CTBP2P4-201ENST00000513884 920 ntBASIC16.23■□□□□ 0.19
ATP2A2P16615 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC16.23■□□□□ 0.19
ATP2A2P16615 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATP2A2P16615 AP002803.1-201ENST00000528836 498 ntBASIC16.23■□□□□ 0.19
ATP2A2P16615 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP2A2P16615 MIR6842-201ENST00000612539 65 ntBASIC16.23■□□□□ 0.19
ATP2A2P16615 AC007718.1-201ENST00000621078 280 ntBASIC16.23■□□□□ 0.19
ATP2A2P16615 YRDCP1-201ENST00000621419 643 ntBASIC16.23■□□□□ 0.19
ATP2A2P16615 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP2A2P16615 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.23■□□□□ 0.19
ATP2A2P16615 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ATP2A2P16615 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
ATP2A2P16615 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
ATP2A2P16615 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP2A2P16615 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATP2A2P16615 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ATP2A2P16615 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.23■□□□□ 0.19
ATP2A2P16615 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
ATP2A2P16615 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP2A2P16615 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP2A2P16615 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.22■□□□□ 0.19
ATP2A2P16615 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.22■□□□□ 0.19
ATP2A2P16615 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ATP2A2P16615 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ATP2A2P16615 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.22■□□□□ 0.19
ATP2A2P16615 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP2A2P16615 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.22■□□□□ 0.19
ATP2A2P16615 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
ATP2A2P16615 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP2A2P16615 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
ATP2A2P16615 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.22■□□□□ 0.19
ATP2A2P16615 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATP2A2P16615 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.22■□□□□ 0.19
ATP2A2P16615 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
ATP2A2P16615 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.22■□□□□ 0.19
ATP2A2P16615 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
ATP2A2P16615 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.22■□□□□ 0.19
ATP2A2P16615 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP2A2P16615 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP2A2P16615 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
ATP2A2P16615 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATP2A2P16615 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.22■□□□□ 0.19
ATP2A2P16615 AP000356.3-201ENST00000382243 753 ntBASIC16.22■□□□□ 0.19
ATP2A2P16615 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATP2A2P16615 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.22■□□□□ 0.19
ATP2A2P16615 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATP2A2P16615 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATP2A2P16615 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ATP2A2P16615 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATP2A2P16615 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.22■□□□□ 0.19
ATP2A2P16615 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP2A2P16615 GMFG-209ENST00000600322 622 ntTSL 5 BASIC16.22■□□□□ 0.19
ATP2A2P16615 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.22■□□□□ 0.19
ATP2A2P16615 AC242376.2-201ENST00000619355 883 ntBASIC16.22■□□□□ 0.19
ATP2A2P16615 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.22■□□□□ 0.19
ATP2A2P16615 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP2A2P16615 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ATP2A2P16615 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
ATP2A2P16615 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ATP2A2P16615 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP2A2P16615 FAM90A2P-201ENST00000511144 1395 ntBASIC16.22■□□□□ 0.19
ATP2A2P16615 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.22■□□□□ 0.19
ATP2A2P16615 FAM90A25P-201ENST00000528404 1395 ntBASIC16.22■□□□□ 0.19
ATP2A2P16615 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.22■□□□□ 0.19
ATP2A2P16615 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
ATP2A2P16615 ABR-205ENST00000544583 5595 ntTSL 2 BASIC16.22■□□□□ 0.19
ATP2A2P16615 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP2A2P16615 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms