Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PPP3CBP16298 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
PPP3CBP16298 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PPP3CBP16298 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.24□□□□□ -0.29
PPP3CBP16298 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
PPP3CBP16298 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.24□□□□□ -0.29
PPP3CBP16298 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PPP3CBP16298 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
PPP3CBP16298 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
PPP3CBP16298 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
PPP3CBP16298 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PPP3CBP16298 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PPP3CBP16298 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PPP3CBP16298 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PPP3CBP16298 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PPP3CBP16298 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
PPP3CBP16298 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PPP3CBP16298 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
PPP3CBP16298 AC099521.3-201ENST00000624251 2938 ntBASIC13.23□□□□□ -0.29
PPP3CBP16298 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
PPP3CBP16298 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PPP3CBP16298 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.23□□□□□ -0.29
PPP3CBP16298 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PPP3CBP16298 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.23□□□□□ -0.29
PPP3CBP16298 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
PPP3CBP16298 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
PPP3CBP16298 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
PPP3CBP16298 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.23□□□□□ -0.29
PPP3CBP16298 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
PPP3CBP16298 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PPP3CBP16298 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PPP3CBP16298 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PPP3CBP16298 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.23□□□□□ -0.29
PPP3CBP16298 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PPP3CBP16298 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PPP3CBP16298 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PPP3CBP16298 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PPP3CBP16298 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PPP3CBP16298 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PPP3CBP16298 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PPP3CBP16298 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.23□□□□□ -0.29
PPP3CBP16298 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.23□□□□□ -0.29
PPP3CBP16298 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.23□□□□□ -0.29
PPP3CBP16298 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.23□□□□□ -0.29
PPP3CBP16298 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
PPP3CBP16298 COX5BP1-201ENST00000507622 393 ntBASIC13.23□□□□□ -0.29
PPP3CBP16298 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.23□□□□□ -0.29
PPP3CBP16298 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
PPP3CBP16298 AP001258.2-201ENST00000529891 490 ntBASIC13.23□□□□□ -0.29
PPP3CBP16298 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PPP3CBP16298 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.23□□□□□ -0.29
PPP3CBP16298 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PPP3CBP16298 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.23□□□□□ -0.29
PPP3CBP16298 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.23□□□□□ -0.29
PPP3CBP16298 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.23□□□□□ -0.29
PPP3CBP16298 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.23□□□□□ -0.29
PPP3CBP16298 MIR4741-201ENST00000579822 90 ntBASIC13.23□□□□□ -0.29
PPP3CBP16298 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
PPP3CBP16298 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.23□□□□□ -0.29
PPP3CBP16298 AC244157.2-201ENST00000616239 1006 ntBASIC13.23□□□□□ -0.29
PPP3CBP16298 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
PPP3CBP16298 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PPP3CBP16298 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PPP3CBP16298 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.23□□□□□ -0.29
PPP3CBP16298 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.23□□□□□ -0.29
PPP3CBP16298 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PPP3CBP16298 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PPP3CBP16298 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.23□□□□□ -0.29
PPP3CBP16298 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PPP3CBP16298 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.23□□□□□ -0.29
PPP3CBP16298 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PPP3CBP16298 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PPP3CBP16298 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PPP3CBP16298 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
PPP3CBP16298 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
PPP3CBP16298 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PPP3CBP16298 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
PPP3CBP16298 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PPP3CBP16298 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.23□□□□□ -0.29
PPP3CBP16298 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
PPP3CBP16298 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.22□□□□□ -0.29
PPP3CBP16298 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PPP3CBP16298 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
PPP3CBP16298 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PPP3CBP16298 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PPP3CBP16298 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PPP3CBP16298 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PPP3CBP16298 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
PPP3CBP16298 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.22□□□□□ -0.29
PPP3CBP16298 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PPP3CBP16298 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PPP3CBP16298 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PPP3CBP16298 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PPP3CBP16298 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
PPP3CBP16298 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PPP3CBP16298 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PPP3CBP16298 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PPP3CBP16298 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
PPP3CBP16298 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PPP3CBP16298 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms