Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.84□□□□□ -0.35
SFTPBP07988 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SFTPBP07988 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
SFTPBP07988 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.84□□□□□ -0.35
SFTPBP07988 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SFTPBP07988 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SFTPBP07988 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SFTPBP07988 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.84□□□□□ -0.35
SFTPBP07988 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SFTPBP07988 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
SFTPBP07988 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SFTPBP07988 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.83□□□□□ -0.35
SFTPBP07988 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.35
SFTPBP07988 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SFTPBP07988 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
SFTPBP07988 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SFTPBP07988 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.83□□□□□ -0.35
SFTPBP07988 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
SFTPBP07988 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.83□□□□□ -0.35
SFTPBP07988 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.83□□□□□ -0.35
SFTPBP07988 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.83□□□□□ -0.35
SFTPBP07988 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.83□□□□□ -0.35
SFTPBP07988 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
SFTPBP07988 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SFTPBP07988 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SFTPBP07988 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SFTPBP07988 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SFTPBP07988 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SFTPBP07988 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SFTPBP07988 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SFTPBP07988 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SFTPBP07988 AC004899.2-201ENST00000622993 3860 ntBASIC12.83□□□□□ -0.36
SFTPBP07988 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.83□□□□□ -0.36
SFTPBP07988 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SFTPBP07988 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SFTPBP07988 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SFTPBP07988 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SFTPBP07988 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SFTPBP07988 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SFTPBP07988 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SFTPBP07988 CICP17-201ENST00000418553 2377 ntBASIC12.83□□□□□ -0.36
SFTPBP07988 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
SFTPBP07988 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SFTPBP07988 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.83□□□□□ -0.36
SFTPBP07988 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SFTPBP07988 GK-202ENST00000378941 458 ntTSL 3 BASIC12.83□□□□□ -0.36
SFTPBP07988 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SFTPBP07988 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SFTPBP07988 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SFTPBP07988 TTTY23B-201ENST00000442790 549 ntBASIC12.83□□□□□ -0.36
SFTPBP07988 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.83□□□□□ -0.36
SFTPBP07988 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC12.83□□□□□ -0.36
SFTPBP07988 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.83□□□□□ -0.36
SFTPBP07988 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.83□□□□□ -0.36
SFTPBP07988 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SFTPBP07988 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC12.83□□□□□ -0.36
SFTPBP07988 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.83□□□□□ -0.36
SFTPBP07988 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.83□□□□□ -0.36
SFTPBP07988 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.83□□□□□ -0.36
SFTPBP07988 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SFTPBP07988 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.83□□□□□ -0.36
SFTPBP07988 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.83□□□□□ -0.36
SFTPBP07988 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC12.83□□□□□ -0.36
SFTPBP07988 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SFTPBP07988 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC12.83□□□□□ -0.36
SFTPBP07988 AL033527.5-201ENST00000641382 801 ntBASIC12.83□□□□□ -0.36
SFTPBP07988 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.83□□□□□ -0.36
SFTPBP07988 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SFTPBP07988 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
SFTPBP07988 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SFTPBP07988 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.83□□□□□ -0.36
SFTPBP07988 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SFTPBP07988 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SFTPBP07988 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.83□□□□□ -0.36
SFTPBP07988 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SFTPBP07988 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
SFTPBP07988 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SFTPBP07988 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SFTPBP07988 AC092135.3-201ENST00000624151 1846 ntBASIC12.83□□□□□ -0.36
SFTPBP07988 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SFTPBP07988 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.36
SFTPBP07988 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
SFTPBP07988 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SFTPBP07988 INTS4P2-202ENST00000614726 2019 ntBASIC12.83□□□□□ -0.36
SFTPBP07988 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.83□□□□□ -0.36
SFTPBP07988 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SFTPBP07988 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SFTPBP07988 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SFTPBP07988 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SFTPBP07988 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SFTPBP07988 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SFTPBP07988 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.82□□□□□ -0.36
SFTPBP07988 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SFTPBP07988 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SFTPBP07988 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SFTPBP07988 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SFTPBP07988 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SFTPBP07988 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SFTPBP07988 MBLAC2-202ENST00000514906 1936 ntBASIC12.82□□□□□ -0.36
SFTPBP07988 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms