Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC18.66■□□□□ 0.58
COL5A2P05997 MT3-202ENST00000561640 514 ntTSL 3 BASIC18.66■□□□□ 0.58
COL5A2P05997 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC18.66■□□□□ 0.58
COL5A2P05997 RN7SL121P-201ENST00000584223 273 ntBASIC18.66■□□□□ 0.58
COL5A2P05997 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC18.66■□□□□ 0.58
COL5A2P05997 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC18.66■□□□□ 0.58
COL5A2P05997 AC008536.3-201ENST00000623282 1599 ntBASIC18.66■□□□□ 0.58
COL5A2P05997 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC18.66■□□□□ 0.58
COL5A2P05997 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
COL5A2P05997 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
COL5A2P05997 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL5A2P05997 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
COL5A2P05997 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.66■□□□□ 0.58
COL5A2P05997 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
COL5A2P05997 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.66■□□□□ 0.58
COL5A2P05997 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL5A2P05997 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL5A2P05997 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC18.66■□□□□ 0.58
COL5A2P05997 AJ011931.1-201ENST00000618749 2492 ntBASIC18.66■□□□□ 0.58
COL5A2P05997 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL5A2P05997 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL5A2P05997 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL5A2P05997 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC18.65■□□□□ 0.58
COL5A2P05997 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL5A2P05997 NQO2-204ENST00000380454 851 ntTSL 2 BASIC18.65■□□□□ 0.58
COL5A2P05997 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC18.65■□□□□ 0.58
COL5A2P05997 BAK1P2-201ENST00000532665 631 ntBASIC18.65■□□□□ 0.58
COL5A2P05997 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC18.65■□□□□ 0.58
COL5A2P05997 AC090510.3-201ENST00000615831 821 ntBASIC18.65■□□□□ 0.58
COL5A2P05997 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC18.65■□□□□ 0.58
COL5A2P05997 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
COL5A2P05997 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL5A2P05997 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL5A2P05997 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.65■□□□□ 0.58
COL5A2P05997 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL5A2P05997 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL5A2P05997 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC18.65■□□□□ 0.58
COL5A2P05997 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL5A2P05997 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL5A2P05997 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL5A2P05997 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
COL5A2P05997 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL5A2P05997 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL5A2P05997 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL5A2P05997 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL5A2P05997 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
COL5A2P05997 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL5A2P05997 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL5A2P05997 EEF1DP5-201ENST00000431410 772 ntBASIC18.65■□□□□ 0.58
COL5A2P05997 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC18.65■□□□□ 0.58
COL5A2P05997 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC18.65■□□□□ 0.58
COL5A2P05997 GOLGA2P8-201ENST00000505201 779 ntBASIC18.65■□□□□ 0.58
COL5A2P05997 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC18.65■□□□□ 0.58
COL5A2P05997 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC18.65■□□□□ 0.58
COL5A2P05997 MIR4746-201ENST00000579802 71 ntBASIC18.65■□□□□ 0.58
COL5A2P05997 AC010531.8-201ENST00000623341 685 ntBASIC18.65■□□□□ 0.58
COL5A2P05997 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
COL5A2P05997 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC18.64■□□□□ 0.58
COL5A2P05997 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.64■□□□□ 0.58
COL5A2P05997 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
COL5A2P05997 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
COL5A2P05997 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC18.64■□□□□ 0.57
COL5A2P05997 CICP6-201ENST00000457191 2729 ntBASIC18.64■□□□□ 0.57
COL5A2P05997 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
COL5A2P05997 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL5A2P05997 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL5A2P05997 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COL5A2P05997 AC092115.1-201ENST00000566277 1402 ntBASIC18.64■□□□□ 0.57
COL5A2P05997 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL5A2P05997 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COL5A2P05997 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL5A2P05997 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL5A2P05997 USP39-220ENST00000613444 2161 ntTSL 2 BASIC18.64■□□□□ 0.57
COL5A2P05997 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
COL5A2P05997 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL5A2P05997 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COL5A2P05997 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COL5A2P05997 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL5A2P05997 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC18.64■□□□□ 0.57
COL5A2P05997 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC18.64■□□□□ 0.57
COL5A2P05997 AC120498.7-201ENST00000562876 330 ntBASIC18.64■□□□□ 0.57
COL5A2P05997 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
COL5A2P05997 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL5A2P05997 WASH7P-201ENST00000488147 1351 ntBASIC18.64■□□□□ 0.57
COL5A2P05997 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL5A2P05997 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL5A2P05997 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL5A2P05997 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC18.63■□□□□ 0.57
COL5A2P05997 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL5A2P05997 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL5A2P05997 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL5A2P05997 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL5A2P05997 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL5A2P05997 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
COL5A2P05997 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL5A2P05997 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC18.63■□□□□ 0.57
COL5A2P05997 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL5A2P05997 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC18.63■□□□□ 0.57
COL5A2P05997 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC18.63■□□□□ 0.57
COL5A2P05997 BCL2L12P1-201ENST00000508390 733 ntBASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms