Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
APOBP04114 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
APOBP04114 HLA-DQB2-231ENST00000435145 2026 ntBASIC8.75□□□□□ -1.01
APOBP04114 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
APOBP04114 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
APOBP04114 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
APOBP04114 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC8.75□□□□□ -1.01
APOBP04114 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC8.75□□□□□ -1.01
APOBP04114 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
APOBP04114 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
APOBP04114 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
APOBP04114 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC8.75□□□□□ -1.01
APOBP04114 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
APOBP04114 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC8.75□□□□□ -1.01
APOBP04114 ABCC6P2-201ENST00000526069 590 ntBASIC8.75□□□□□ -1.01
APOBP04114 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC8.75□□□□□ -1.01
APOBP04114 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
APOBP04114 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
APOBP04114 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC8.75□□□□□ -1.01
APOBP04114 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC8.75□□□□□ -1.01
APOBP04114 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
APOBP04114 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
APOBP04114 ADK-205ENST00000539909 1866 ntTSL 2 BASIC8.75□□□□□ -1.01
APOBP04114 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC8.75□□□□□ -1.01
APOBP04114 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC8.75□□□□□ -1.01
APOBP04114 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC8.75□□□□□ -1.01
APOBP04114 MIR611-201ENST00000384869 67 ntBASIC8.75□□□□□ -1.01
APOBP04114 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC8.75□□□□□ -1.01
APOBP04114 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC8.75□□□□□ -1.01
APOBP04114 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC8.75□□□□□ -1.01
APOBP04114 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC8.75□□□□□ -1.01
APOBP04114 PSME2P2-201ENST00000453033 700 ntBASIC8.75□□□□□ -1.01
APOBP04114 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC8.75□□□□□ -1.01
APOBP04114 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC8.75□□□□□ -1.01
APOBP04114 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
APOBP04114 URB1-AS1-201ENST00000534991 831 ntBASIC8.75□□□□□ -1.01
APOBP04114 MIR4640-201ENST00000581824 90 ntBASIC8.75□□□□□ -1.01
APOBP04114 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
APOBP04114 AL008638.4-201ENST00000624792 1315 ntBASIC8.75□□□□□ -1.01
APOBP04114 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
APOBP04114 DUT-208ENST00000559540 1441 ntTSL 2 BASIC8.74□□□□□ -1.01
APOBP04114 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
APOBP04114 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC8.74□□□□□ -1.01
APOBP04114 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC8.74□□□□□ -1.01
APOBP04114 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
APOBP04114 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
APOBP04114 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
APOBP04114 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
APOBP04114 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC8.74□□□□□ -1.01
APOBP04114 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
APOBP04114 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC8.74□□□□□ -1.01
APOBP04114 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
APOBP04114 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC8.74□□□□□ -1.01
APOBP04114 ASLP1-201ENST00000428790 637 ntBASIC8.74□□□□□ -1.01
APOBP04114 RN7SL33P-201ENST00000462543 342 ntBASIC8.74□□□□□ -1.01
APOBP04114 GRAMD4P6-201ENST00000556999 244 ntBASIC8.74□□□□□ -1.01
APOBP04114 GACAT2-201ENST00000579368 818 ntTSL 2 BASIC8.74□□□□□ -1.01
APOBP04114 AC112220.4-201ENST00000604982 1263 ntBASIC8.74□□□□□ -1.01
APOBP04114 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
APOBP04114 AL590556.2-202ENST00000636906 844 ntBASIC8.74□□□□□ -1.01
APOBP04114 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC8.74□□□□□ -1.01
APOBP04114 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
APOBP04114 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC8.74□□□□□ -1.01
APOBP04114 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
APOBP04114 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
APOBP04114 AC138035.3-201ENST00000622706 2791 ntBASIC8.74□□□□□ -1.01
APOBP04114 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC8.74□□□□□ -1.01
APOBP04114 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
APOBP04114 DOC2GP-204ENST00000639052 2548 ntBASIC8.74□□□□□ -1.01
APOBP04114 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC8.74□□□□□ -1.01
APOBP04114 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC8.74□□□□□ -1.01
APOBP04114 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC8.74□□□□□ -1.01
APOBP04114 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC8.74□□□□□ -1.01
APOBP04114 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
APOBP04114 GH1-203ENST00000351388 685 ntTSL 2 BASIC8.74□□□□□ -1.01
APOBP04114 SAP18P2-201ENST00000434334 459 ntBASIC8.74□□□□□ -1.01
APOBP04114 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC8.74□□□□□ -1.01
APOBP04114 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
APOBP04114 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC8.74□□□□□ -1.01
APOBP04114 AL512310.5-201ENST00000551999 515 ntBASIC8.74□□□□□ -1.01
APOBP04114 RN7SL202P-201ENST00000584410 262 ntBASIC8.74□□□□□ -1.01
APOBP04114 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC8.74□□□□□ -1.01
APOBP04114 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
APOBP04114 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
APOBP04114 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
APOBP04114 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
APOBP04114 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
APOBP04114 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
APOBP04114 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
APOBP04114 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
APOBP04114 DNM1P46-202ENST00000415963 882 ntBASIC8.74□□□□□ -1.01
APOBP04114 CA5BP1-205ENST00000435806 1064 ntBASIC8.74□□□□□ -1.01
APOBP04114 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC8.74□□□□□ -1.01
APOBP04114 FAM187B2P-201ENST00000577135 713 ntBASIC8.74□□□□□ -1.01
APOBP04114 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
APOBP04114 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC8.74□□□□□ -1.01
APOBP04114 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC8.74□□□□□ -1.01
APOBP04114 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
APOBP04114 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
APOBP04114 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms