Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
MT-ND1P03886 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
MT-ND1P03886 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MT-ND1P03886 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
MT-ND1P03886 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.88□□□□□ -0.19
MT-ND1P03886 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
MT-ND1P03886 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MT-ND1P03886 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.88□□□□□ -0.19
MT-ND1P03886 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.88□□□□□ -0.19
MT-ND1P03886 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.88□□□□□ -0.19
MT-ND1P03886 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.88□□□□□ -0.19
MT-ND1P03886 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.88□□□□□ -0.19
MT-ND1P03886 CLK3P2-201ENST00000427566 1453 ntBASIC13.88□□□□□ -0.19
MT-ND1P03886 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
MT-ND1P03886 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MT-ND1P03886 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
MT-ND1P03886 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MT-ND1P03886 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.88□□□□□ -0.19
MT-ND1P03886 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MT-ND1P03886 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MT-ND1P03886 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.88□□□□□ -0.19
MT-ND1P03886 METTL21AP1-201ENST00000438852 635 ntBASIC13.88□□□□□ -0.19
MT-ND1P03886 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.88□□□□□ -0.19
MT-ND1P03886 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.88□□□□□ -0.19
MT-ND1P03886 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MT-ND1P03886 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.88□□□□□ -0.19
MT-ND1P03886 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.88□□□□□ -0.19
MT-ND1P03886 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC13.88□□□□□ -0.19
MT-ND1P03886 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13.88□□□□□ -0.19
MT-ND1P03886 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.88□□□□□ -0.19
MT-ND1P03886 SRD5A3P1-201ENST00000603021 949 ntBASIC13.88□□□□□ -0.19
MT-ND1P03886 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
MT-ND1P03886 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
MT-ND1P03886 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MT-ND1P03886 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MT-ND1P03886 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
MT-ND1P03886 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
MT-ND1P03886 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MT-ND1P03886 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.88□□□□□ -0.19
MT-ND1P03886 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.88□□□□□ -0.19
MT-ND1P03886 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
MT-ND1P03886 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
MT-ND1P03886 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
MT-ND1P03886 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MT-ND1P03886 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.87□□□□□ -0.19
MT-ND1P03886 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.87□□□□□ -0.19
MT-ND1P03886 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MT-ND1P03886 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
MT-ND1P03886 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.87□□□□□ -0.19
MT-ND1P03886 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MT-ND1P03886 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
MT-ND1P03886 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MT-ND1P03886 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.87□□□□□ -0.19
MT-ND1P03886 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
MT-ND1P03886 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MT-ND1P03886 AL136172.1-201ENST00000598590 1394 ntBASIC13.87□□□□□ -0.19
MT-ND1P03886 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
MT-ND1P03886 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
MT-ND1P03886 AC011840.2-201ENST00000563063 1520 ntBASIC13.87□□□□□ -0.19
MT-ND1P03886 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MT-ND1P03886 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
MT-ND1P03886 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MT-ND1P03886 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.87□□□□□ -0.19
MT-ND1P03886 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.87□□□□□ -0.19
MT-ND1P03886 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.87□□□□□ -0.19
MT-ND1P03886 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.87□□□□□ -0.19
MT-ND1P03886 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.87□□□□□ -0.19
MT-ND1P03886 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
MT-ND1P03886 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.87□□□□□ -0.19
MT-ND1P03886 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.87□□□□□ -0.19
MT-ND1P03886 AC135586.1-201ENST00000539323 574 ntBASIC13.87□□□□□ -0.19
MT-ND1P03886 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.87□□□□□ -0.19
MT-ND1P03886 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.87□□□□□ -0.19
MT-ND1P03886 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.87□□□□□ -0.19
MT-ND1P03886 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
MT-ND1P03886 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.87□□□□□ -0.19
MT-ND1P03886 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.87□□□□□ -0.19
MT-ND1P03886 AC107373.2-201ENST00000607735 490 ntBASIC13.87□□□□□ -0.19
MT-ND1P03886 AL390754.1-201ENST00000619088 582 ntBASIC13.87□□□□□ -0.19
MT-ND1P03886 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
MT-ND1P03886 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
MT-ND1P03886 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
MT-ND1P03886 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
MT-ND1P03886 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
MT-ND1P03886 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MT-ND1P03886 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MT-ND1P03886 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MT-ND1P03886 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MT-ND1P03886 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MT-ND1P03886 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
MT-ND1P03886 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
MT-ND1P03886 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.87□□□□□ -0.19
MT-ND1P03886 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
MT-ND1P03886 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
MT-ND1P03886 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
MT-ND1P03886 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MT-ND1P03886 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
MT-ND1P03886 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
MT-ND1P03886 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
MT-ND1P03886 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms