Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.12□□□□□ -0.31
APOA1P02647 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.12□□□□□ -0.31
APOA1P02647 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOA1P02647 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
APOA1P02647 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOA1P02647 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOA1P02647 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.12□□□□□ -0.31
APOA1P02647 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.12□□□□□ -0.31
APOA1P02647 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOA1P02647 CICP1-201ENST00000416803 2410 ntBASIC13.12□□□□□ -0.31
APOA1P02647 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOA1P02647 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.12□□□□□ -0.31
APOA1P02647 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC13.12□□□□□ -0.31
APOA1P02647 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
APOA1P02647 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOA1P02647 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
APOA1P02647 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOA1P02647 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOA1P02647 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
APOA1P02647 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
APOA1P02647 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOA1P02647 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOA1P02647 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
APOA1P02647 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
APOA1P02647 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOA1P02647 GOLGA2P5-201ENST00000266746 2395 ntBASIC13.12□□□□□ -0.31
APOA1P02647 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOA1P02647 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC13.11□□□□□ -0.31
APOA1P02647 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.11□□□□□ -0.31
APOA1P02647 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOA1P02647 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOA1P02647 NBN-203ENST00000409330 4523 ntTSL 5 BASIC13.11□□□□□ -0.31
APOA1P02647 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOA1P02647 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOA1P02647 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOA1P02647 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.11□□□□□ -0.31
APOA1P02647 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOA1P02647 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOA1P02647 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC13.11□□□□□ -0.31
APOA1P02647 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.11□□□□□ -0.31
APOA1P02647 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.11□□□□□ -0.31
APOA1P02647 AC107375.1-201ENST00000564464 2231 ntBASIC13.11□□□□□ -0.31
APOA1P02647 AC072061.1-201ENST00000569710 2234 ntBASIC13.11□□□□□ -0.31
APOA1P02647 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOA1P02647 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC13.11□□□□□ -0.31
APOA1P02647 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOA1P02647 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
APOA1P02647 AC022400.8-201ENST00000623453 3599 ntBASIC13.11□□□□□ -0.31
APOA1P02647 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOA1P02647 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
APOA1P02647 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13.11□□□□□ -0.31
APOA1P02647 AC074386.1-202ENST00000463561 864 ntBASIC13.11□□□□□ -0.31
APOA1P02647 SLED1-202ENST00000512051 380 ntBASIC13.11□□□□□ -0.31
APOA1P02647 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.11□□□□□ -0.31
APOA1P02647 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.11□□□□□ -0.31
APOA1P02647 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
APOA1P02647 AL135744.1-201ENST00000565098 629 ntBASIC13.11□□□□□ -0.31
APOA1P02647 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.11□□□□□ -0.31
APOA1P02647 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC13.11□□□□□ -0.31
APOA1P02647 PRKN-208ENST00000610470 531 ntTSL 2 BASIC13.11□□□□□ -0.31
APOA1P02647 PRKN-209ENST00000612485 225 ntTSL 5 BASIC13.11□□□□□ -0.31
APOA1P02647 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.11□□□□□ -0.31
APOA1P02647 AC148477.8-201ENST00000624298 468 ntBASIC13.11□□□□□ -0.31
APOA1P02647 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.11□□□□□ -0.31
APOA1P02647 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13.11□□□□□ -0.31
APOA1P02647 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
APOA1P02647 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
APOA1P02647 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOA1P02647 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOA1P02647 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOA1P02647 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOA1P02647 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.11□□□□□ -0.31
APOA1P02647 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.11□□□□□ -0.31
APOA1P02647 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOA1P02647 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOA1P02647 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC13.11□□□□□ -0.31
APOA1P02647 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC13.11□□□□□ -0.31
APOA1P02647 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOA1P02647 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOA1P02647 AL022323.5-201ENST00000624101 2059 ntBASIC13.11□□□□□ -0.31
APOA1P02647 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC13.11□□□□□ -0.31
APOA1P02647 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOA1P02647 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOA1P02647 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOA1P02647 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOA1P02647 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.11□□□□□ -0.31
APOA1P02647 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOA1P02647 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOA1P02647 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOA1P02647 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOA1P02647 LINC01544-201ENST00000567801 5168 ntTSL 2 BASIC13.1□□□□□ -0.31
APOA1P02647 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOA1P02647 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APOA1P02647 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOA1P02647 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APOA1P02647 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
APOA1P02647 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
APOA1P02647 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
APOA1P02647 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
APOA1P02647 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms