Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CNOT4O95628 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CNOT4O95628 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.09□□□□□ -0.31
CNOT4O95628 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CNOT4O95628 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.09□□□□□ -0.31
CNOT4O95628 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.09□□□□□ -0.31
CNOT4O95628 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CNOT4O95628 PUDPP3-201ENST00000445368 636 ntBASIC13.09□□□□□ -0.31
CNOT4O95628 AC004898.1-201ENST00000451057 766 ntBASIC13.09□□□□□ -0.31
CNOT4O95628 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CNOT4O95628 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CNOT4O95628 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CNOT4O95628 AC100850.1-201ENST00000506768 649 ntBASIC13.09□□□□□ -0.31
CNOT4O95628 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC13.09□□□□□ -0.31
CNOT4O95628 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.09□□□□□ -0.31
CNOT4O95628 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.09□□□□□ -0.31
CNOT4O95628 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CNOT4O95628 FOS-206ENST00000555347 1280 ntTSL 2 BASIC13.09□□□□□ -0.31
CNOT4O95628 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
CNOT4O95628 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.09□□□□□ -0.31
CNOT4O95628 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC13.09□□□□□ -0.31
CNOT4O95628 AL031595.1-201ENST00000623969 4709 ntBASIC13.09□□□□□ -0.31
CNOT4O95628 INE2-201ENST00000630399 1874 ntBASIC13.09□□□□□ -0.31
CNOT4O95628 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CNOT4O95628 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CNOT4O95628 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CNOT4O95628 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.09□□□□□ -0.31
CNOT4O95628 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CNOT4O95628 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CNOT4O95628 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.09□□□□□ -0.31
CNOT4O95628 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.09□□□□□ -0.31
CNOT4O95628 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CNOT4O95628 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CNOT4O95628 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CNOT4O95628 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
CNOT4O95628 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CNOT4O95628 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.09□□□□□ -0.31
CNOT4O95628 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CNOT4O95628 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CNOT4O95628 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.09□□□□□ -0.31
CNOT4O95628 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.09□□□□□ -0.31
CNOT4O95628 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CNOT4O95628 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CNOT4O95628 AC091951.1-201ENST00000512854 2465 ntBASIC13.08□□□□□ -0.31
CNOT4O95628 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
CNOT4O95628 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CNOT4O95628 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.08□□□□□ -0.31
CNOT4O95628 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CNOT4O95628 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.08□□□□□ -0.32
CNOT4O95628 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CNOT4O95628 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CNOT4O95628 CICP24-201ENST00000605464 2705 ntBASIC13.08□□□□□ -0.32
CNOT4O95628 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.08□□□□□ -0.32
CNOT4O95628 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CNOT4O95628 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
CNOT4O95628 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.08□□□□□ -0.32
CNOT4O95628 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CNOT4O95628 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CNOT4O95628 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CNOT4O95628 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CNOT4O95628 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC13.08□□□□□ -0.32
CNOT4O95628 TUBB8P8-201ENST00000458717 1058 ntBASIC13.08□□□□□ -0.32
CNOT4O95628 AKR7A2P1-201ENST00000460134 915 ntBASIC13.08□□□□□ -0.32
CNOT4O95628 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC13.08□□□□□ -0.32
CNOT4O95628 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.08□□□□□ -0.32
CNOT4O95628 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13.08□□□□□ -0.32
CNOT4O95628 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.08□□□□□ -0.32
CNOT4O95628 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CNOT4O95628 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CNOT4O95628 DUX4L46-201ENST00000566845 751 ntBASIC13.08□□□□□ -0.32
CNOT4O95628 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CNOT4O95628 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CNOT4O95628 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.08□□□□□ -0.32
CNOT4O95628 AL008638.5-201ENST00000623814 1298 ntBASIC13.08□□□□□ -0.32
CNOT4O95628 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CNOT4O95628 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CNOT4O95628 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CNOT4O95628 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CNOT4O95628 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CNOT4O95628 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CNOT4O95628 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CNOT4O95628 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CNOT4O95628 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.08□□□□□ -0.32
CNOT4O95628 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CNOT4O95628 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CNOT4O95628 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CNOT4O95628 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.08□□□□□ -0.32
CNOT4O95628 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CNOT4O95628 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CNOT4O95628 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.08□□□□□ -0.32
CNOT4O95628 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CNOT4O95628 AC106881.1-201ENST00000605849 3329 ntBASIC13.08□□□□□ -0.32
CNOT4O95628 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CNOT4O95628 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.08□□□□□ -0.32
CNOT4O95628 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CNOT4O95628 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CNOT4O95628 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.07□□□□□ -0.32
CNOT4O95628 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.07□□□□□ -0.32
CNOT4O95628 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.07□□□□□ -0.32
CNOT4O95628 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms