Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.46□□□□□ -0.25
NKX2-2O95096 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.46□□□□□ -0.25
NKX2-2O95096 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.46□□□□□ -0.25
NKX2-2O95096 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
NKX2-2O95096 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-2O95096 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.46□□□□□ -0.25
NKX2-2O95096 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-2O95096 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
NKX2-2O95096 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-2O95096 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-2O95096 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.46□□□□□ -0.25
NKX2-2O95096 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
NKX2-2O95096 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-2O95096 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.25
NKX2-2O95096 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-2O95096 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-2O95096 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.46□□□□□ -0.26
NKX2-2O95096 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
NKX2-2O95096 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
NKX2-2O95096 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.46□□□□□ -0.26
NKX2-2O95096 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
NKX2-2O95096 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
NKX2-2O95096 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NKX2-2O95096 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.46□□□□□ -0.26
NKX2-2O95096 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NKX2-2O95096 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
NKX2-2O95096 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
NKX2-2O95096 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
NKX2-2O95096 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NKX2-2O95096 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
NKX2-2O95096 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
NKX2-2O95096 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
NKX2-2O95096 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
NKX2-2O95096 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
NKX2-2O95096 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
NKX2-2O95096 AL022313.4-201ENST00000562756 2046 ntBASIC13.46□□□□□ -0.26
NKX2-2O95096 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.45□□□□□ -0.26
NKX2-2O95096 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.45□□□□□ -0.26
NKX2-2O95096 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-2O95096 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
NKX2-2O95096 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.45□□□□□ -0.26
NKX2-2O95096 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-2O95096 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-2O95096 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-2O95096 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.45□□□□□ -0.26
NKX2-2O95096 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
NKX2-2O95096 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-2O95096 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
NKX2-2O95096 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.45□□□□□ -0.26
NKX2-2O95096 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-2O95096 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.45□□□□□ -0.26
NKX2-2O95096 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-2O95096 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-2O95096 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.45□□□□□ -0.26
NKX2-2O95096 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-2O95096 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-2O95096 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
NKX2-2O95096 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-2O95096 MST1P2-201ENST00000457982 2291 ntBASIC13.45□□□□□ -0.26
NKX2-2O95096 AC011474.4-201ENST00000623523 2076 ntBASIC13.45□□□□□ -0.26
NKX2-2O95096 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.45□□□□□ -0.26
NKX2-2O95096 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-2O95096 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-2O95096 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
NKX2-2O95096 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-2O95096 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.45□□□□□ -0.26
NKX2-2O95096 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-2O95096 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.45□□□□□ -0.26
NKX2-2O95096 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.45□□□□□ -0.26
NKX2-2O95096 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.45□□□□□ -0.26
NKX2-2O95096 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
NKX2-2O95096 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-2O95096 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.45□□□□□ -0.26
NKX2-2O95096 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.45□□□□□ -0.26
NKX2-2O95096 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.45□□□□□ -0.26
NKX2-2O95096 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-2O95096 RN7SL560P-201ENST00000577943 264 ntBASIC13.45□□□□□ -0.26
NKX2-2O95096 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.45□□□□□ -0.26
NKX2-2O95096 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.45□□□□□ -0.26
NKX2-2O95096 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.45□□□□□ -0.26
NKX2-2O95096 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
NKX2-2O95096 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-2O95096 AC090643.2-201ENST00000623442 2029 ntBASIC13.45□□□□□ -0.26
NKX2-2O95096 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-2O95096 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-2O95096 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-2O95096 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
NKX2-2O95096 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-2O95096 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.45□□□□□ -0.26
NKX2-2O95096 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
NKX2-2O95096 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-2O95096 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-2O95096 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-2O95096 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.45□□□□□ -0.26
NKX2-2O95096 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-2O95096 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.45□□□□□ -0.26
NKX2-2O95096 AL359881.3-201ENST00000602640 1721 ntBASIC13.44□□□□□ -0.26
NKX2-2O95096 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-2O95096 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-2O95096 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms