Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 LCN12-202ENST00000371633 579 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC6.3□□□□□ -1.4
USH2AO75445 AL512422.2-201ENST00000426453 551 ntTSL 2 BASIC6.3□□□□□ -1.4
USH2AO75445 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC6.3□□□□□ -1.4
USH2AO75445 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC6.3□□□□□ -1.4
USH2AO75445 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC6.3□□□□□ -1.4
USH2AO75445 IGHVIII-5-2-201ENST00000522505 261 ntBASIC6.3□□□□□ -1.4
USH2AO75445 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC6.3□□□□□ -1.4
USH2AO75445 AP001180.4-201ENST00000584167 823 ntTSL 3 BASIC6.3□□□□□ -1.4
USH2AO75445 CDIPT-AS1-203ENST00000638164 713 ntBASIC6.3□□□□□ -1.4
USH2AO75445 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC6.3□□□□□ -1.4
USH2AO75445 GOLGA8UP-201ENST00000527159 1755 ntBASIC6.3□□□□□ -1.4
USH2AO75445 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
USH2AO75445 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC6.3□□□□□ -1.4
USH2AO75445 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC6.3□□□□□ -1.4
USH2AO75445 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC6.3□□□□□ -1.4
USH2AO75445 RER1-203ENST00000378513 3000 ntTSL 3 BASIC6.3□□□□□ -1.4
USH2AO75445 Z98885.3-201ENST00000624882 1757 ntBASIC6.3□□□□□ -1.4
USH2AO75445 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 MPV17-209ENST00000405983 859 ntTSL 5 BASIC6.3□□□□□ -1.4
USH2AO75445 FTLP3-201ENST00000427242 528 ntBASIC6.3□□□□□ -1.4
USH2AO75445 HNRNPA1P56-201ENST00000505767 954 ntBASIC6.3□□□□□ -1.4
USH2AO75445 HINT1-208ENST00000513012 583 ntTSL 4 BASIC6.3□□□□□ -1.4
USH2AO75445 MIR6741-201ENST00000618782 63 ntBASIC6.3□□□□□ -1.4
USH2AO75445 BX510359.7-201ENST00000619819 630 ntBASIC6.3□□□□□ -1.4
USH2AO75445 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC6.3□□□□□ -1.4
USH2AO75445 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
USH2AO75445 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC6.3□□□□□ -1.4
USH2AO75445 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
USH2AO75445 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
USH2AO75445 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
USH2AO75445 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC6.29□□□□□ -1.4
USH2AO75445 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC6.29□□□□□ -1.4
USH2AO75445 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC6.29□□□□□ -1.4
USH2AO75445 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
USH2AO75445 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC6.29□□□□□ -1.4
USH2AO75445 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
USH2AO75445 RPS6-201ENST00000315377 863 ntTSL 3 BASIC6.29□□□□□ -1.4
USH2AO75445 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC6.29□□□□□ -1.4
USH2AO75445 AL161727.1-201ENST00000457409 530 ntBASIC6.29□□□□□ -1.4
USH2AO75445 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC6.29□□□□□ -1.4
USH2AO75445 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC6.29□□□□□ -1.4
USH2AO75445 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC6.29□□□□□ -1.4
USH2AO75445 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
USH2AO75445 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
USH2AO75445 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC6.29□□□□□ -1.4
USH2AO75445 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
USH2AO75445 CTNNBL1-203ENST00000373473 1493 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
USH2AO75445 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
USH2AO75445 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
USH2AO75445 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC6.29□□□□□ -1.4
USH2AO75445 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC6.29□□□□□ -1.4
USH2AO75445 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
USH2AO75445 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
USH2AO75445 MYL1-202ENST00000352451 1065 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
USH2AO75445 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC6.29□□□□□ -1.4
USH2AO75445 ATP5G1P7-201ENST00000444398 400 ntBASIC6.29□□□□□ -1.4
USH2AO75445 AF186996.6-201ENST00000485294 149 ntBASIC6.29□□□□□ -1.4
USH2AO75445 AC027279.2-201ENST00000561938 793 ntTSL 5 BASIC6.29□□□□□ -1.4
USH2AO75445 AC009812.1-201ENST00000605948 1059 ntBASIC6.29□□□□□ -1.4
USH2AO75445 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC6.29□□□□□ -1.4
USH2AO75445 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC6.29□□□□□ -1.4
USH2AO75445 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC6.29□□□□□ -1.4
USH2AO75445 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
USH2AO75445 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
USH2AO75445 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
USH2AO75445 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
USH2AO75445 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC6.29□□□□□ -1.4
USH2AO75445 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
USH2AO75445 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
USH2AO75445 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC6.29□□□□□ -1.4
USH2AO75445 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
USH2AO75445 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
USH2AO75445 AC008894.3-201ENST00000624324 3103 ntBASIC6.29□□□□□ -1.4
USH2AO75445 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
USH2AO75445 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
USH2AO75445 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC6.29□□□□□ -1.4
USH2AO75445 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
USH2AO75445 MIR339-201ENST00000362153 94 ntBASIC6.29□□□□□ -1.4
USH2AO75445 RHOC-205ENST00000369636 786 ntTSL 2 BASIC6.29□□□□□ -1.4
USH2AO75445 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
USH2AO75445 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
USH2AO75445 GYG1-209ENST00000483267 801 ntTSL 2 BASIC6.29□□□□□ -1.4
USH2AO75445 BCAR1P1-201ENST00000553953 636 ntBASIC6.29□□□□□ -1.4
USH2AO75445 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC6.29□□□□□ -1.4
USH2AO75445 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC6.29□□□□□ -1.4
USH2AO75445 AC005609.1-201ENST00000625195 617 ntTSL 5 BASIC6.29□□□□□ -1.4
USH2AO75445 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
USH2AO75445 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
USH2AO75445 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
USH2AO75445 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
USH2AO75445 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
USH2AO75445 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms