Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.75□□□□□ -0.21
TRIM3O75382 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
TRIM3O75382 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM3O75382 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM3O75382 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM3O75382 DGCR9-201ENST00000609630 2415 ntBASIC13.75□□□□□ -0.21
TRIM3O75382 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM3O75382 AL356585.2-201ENST00000625078 2396 ntBASIC13.75□□□□□ -0.21
TRIM3O75382 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.75□□□□□ -0.21
TRIM3O75382 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.75□□□□□ -0.21
TRIM3O75382 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM3O75382 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM3O75382 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
TRIM3O75382 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
TRIM3O75382 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
TRIM3O75382 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
TRIM3O75382 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM3O75382 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM3O75382 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.74□□□□□ -0.21
TRIM3O75382 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM3O75382 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM3O75382 CICP8-201ENST00000455800 2813 ntBASIC13.74□□□□□ -0.21
TRIM3O75382 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TRIM3O75382 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM3O75382 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM3O75382 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM3O75382 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM3O75382 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM3O75382 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.74□□□□□ -0.21
TRIM3O75382 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM3O75382 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM3O75382 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TRIM3O75382 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM3O75382 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM3O75382 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.74□□□□□ -0.21
TRIM3O75382 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM3O75382 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM3O75382 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.74□□□□□ -0.21
TRIM3O75382 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TRIM3O75382 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.74□□□□□ -0.21
TRIM3O75382 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.74□□□□□ -0.21
TRIM3O75382 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.74□□□□□ -0.21
TRIM3O75382 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.74□□□□□ -0.21
TRIM3O75382 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM3O75382 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
TRIM3O75382 C2orf69P2-201ENST00000562032 1123 ntBASIC13.74□□□□□ -0.21
TRIM3O75382 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.74□□□□□ -0.21
TRIM3O75382 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
TRIM3O75382 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.74□□□□□ -0.21
TRIM3O75382 AC010328.2-201ENST00000597698 1111 ntBASIC13.74□□□□□ -0.21
TRIM3O75382 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.74□□□□□ -0.21
TRIM3O75382 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM3O75382 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
TRIM3O75382 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM3O75382 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM3O75382 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM3O75382 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM3O75382 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM3O75382 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.74□□□□□ -0.21
TRIM3O75382 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.74□□□□□ -0.21
TRIM3O75382 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM3O75382 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TRIM3O75382 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.74□□□□□ -0.21
TRIM3O75382 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM3O75382 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM3O75382 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
TRIM3O75382 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TRIM3O75382 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TRIM3O75382 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.74□□□□□ -0.21
TRIM3O75382 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.74□□□□□ -0.21
TRIM3O75382 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
TRIM3O75382 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM3O75382 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM3O75382 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM3O75382 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM3O75382 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.73□□□□□ -0.21
TRIM3O75382 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TRIM3O75382 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM3O75382 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM3O75382 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM3O75382 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM3O75382 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM3O75382 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
TRIM3O75382 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM3O75382 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.73□□□□□ -0.21
TRIM3O75382 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
TRIM3O75382 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM3O75382 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
TRIM3O75382 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TRIM3O75382 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM3O75382 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM3O75382 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.73□□□□□ -0.21
TRIM3O75382 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.73□□□□□ -0.21
TRIM3O75382 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.73□□□□□ -0.21
TRIM3O75382 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.73□□□□□ -0.21
TRIM3O75382 AL355994.2-201ENST00000447882 704 ntBASIC13.73□□□□□ -0.21
TRIM3O75382 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TRIM3O75382 FTLP10-202ENST00000505798 471 ntBASIC13.73□□□□□ -0.21
TRIM3O75382 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.73□□□□□ -0.21
TRIM3O75382 AC106820.3-201ENST00000561653 397 ntBASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms