Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.15□□□□□ -0.14
CPNE3O75131 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CPNE3O75131 AL008707.1-201ENST00000422498 534 ntBASIC14.15□□□□□ -0.14
CPNE3O75131 TLE1P1-201ENST00000422965 589 ntBASIC14.15□□□□□ -0.14
CPNE3O75131 NKAIN1P1-201ENST00000435754 582 ntBASIC14.15□□□□□ -0.14
CPNE3O75131 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.15□□□□□ -0.14
CPNE3O75131 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.15□□□□□ -0.14
CPNE3O75131 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.15□□□□□ -0.14
CPNE3O75131 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.15□□□□□ -0.14
CPNE3O75131 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CPNE3O75131 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.15□□□□□ -0.14
CPNE3O75131 AC100827.2-201ENST00000563214 1194 ntBASIC14.15□□□□□ -0.14
CPNE3O75131 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.15□□□□□ -0.14
CPNE3O75131 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CPNE3O75131 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.15□□□□□ -0.14
CPNE3O75131 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.15□□□□□ -0.14
CPNE3O75131 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.15□□□□□ -0.14
CPNE3O75131 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.15□□□□□ -0.14
CPNE3O75131 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPNE3O75131 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPNE3O75131 AP000845.1-201ENST00000581677 2131 ntBASIC14.15□□□□□ -0.14
CPNE3O75131 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPNE3O75131 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CPNE3O75131 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CPNE3O75131 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPNE3O75131 SHC1P1-201ENST00000425230 1745 ntBASIC14.15□□□□□ -0.14
CPNE3O75131 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CPNE3O75131 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPNE3O75131 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPNE3O75131 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPNE3O75131 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CPNE3O75131 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPNE3O75131 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.15□□□□□ -0.14
CPNE3O75131 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CPNE3O75131 AL138725.1-201ENST00000407347 1314 ntBASIC14.15□□□□□ -0.15
CPNE3O75131 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.15□□□□□ -0.15
CPNE3O75131 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE3O75131 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE3O75131 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.14□□□□□ -0.15
CPNE3O75131 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CPNE3O75131 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE3O75131 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE3O75131 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE3O75131 MROH4P-201ENST00000431302 1578 ntBASIC14.14□□□□□ -0.15
CPNE3O75131 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.14□□□□□ -0.15
CPNE3O75131 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.14□□□□□ -0.15
CPNE3O75131 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CPNE3O75131 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
CPNE3O75131 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE3O75131 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE3O75131 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.14□□□□□ -0.15
CPNE3O75131 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CPNE3O75131 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE3O75131 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE3O75131 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE3O75131 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.14□□□□□ -0.15
CPNE3O75131 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.14□□□□□ -0.15
CPNE3O75131 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.14□□□□□ -0.15
CPNE3O75131 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.14□□□□□ -0.15
CPNE3O75131 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.14□□□□□ -0.15
CPNE3O75131 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE3O75131 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE3O75131 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.14□□□□□ -0.15
CPNE3O75131 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CPNE3O75131 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE3O75131 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE3O75131 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE3O75131 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.14□□□□□ -0.15
CPNE3O75131 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE3O75131 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.14□□□□□ -0.15
CPNE3O75131 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE3O75131 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE3O75131 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CPNE3O75131 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.14□□□□□ -0.15
CPNE3O75131 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.14□□□□□ -0.15
CPNE3O75131 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE3O75131 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE3O75131 INE2-201ENST00000630399 1874 ntBASIC14.14□□□□□ -0.15
CPNE3O75131 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.14□□□□□ -0.15
CPNE3O75131 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.14□□□□□ -0.15
CPNE3O75131 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CPNE3O75131 AC091951.1-201ENST00000512854 2465 ntBASIC14.14□□□□□ -0.15
CPNE3O75131 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE3O75131 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.14□□□□□ -0.15
CPNE3O75131 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CPNE3O75131 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE3O75131 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.13□□□□□ -0.15
CPNE3O75131 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.13□□□□□ -0.15
CPNE3O75131 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE3O75131 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.13□□□□□ -0.15
CPNE3O75131 AC009093.2-202ENST00000620513 2079 ntBASIC14.13□□□□□ -0.15
CPNE3O75131 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CPNE3O75131 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE3O75131 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE3O75131 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE3O75131 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE3O75131 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
CPNE3O75131 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE3O75131 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.13□□□□□ -0.15
CPNE3O75131 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms