Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ABCC4O15439 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ABCC4O15439 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ABCC4O15439 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ABCC4O15439 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ABCC4O15439 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ABCC4O15439 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ABCC4O15439 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ABCC4O15439 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
ABCC4O15439 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ABCC4O15439 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
ABCC4O15439 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ABCC4O15439 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
ABCC4O15439 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC18.44■□□□□ 0.54
ABCC4O15439 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ABCC4O15439 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ABCC4O15439 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
ABCC4O15439 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
ABCC4O15439 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ABCC4O15439 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
ABCC4O15439 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
ABCC4O15439 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
ABCC4O15439 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ABCC4O15439 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
ABCC4O15439 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC18.44■□□□□ 0.54
ABCC4O15439 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC18.44■□□□□ 0.54
ABCC4O15439 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC18.44■□□□□ 0.54
ABCC4O15439 LY6E-208ENST00000520531 490 ntTSL 2 BASIC18.44■□□□□ 0.54
ABCC4O15439 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
ABCC4O15439 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ABCC4O15439 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC18.44■□□□□ 0.54
ABCC4O15439 MIR3147-201ENST00000577811 66 ntBASIC18.44■□□□□ 0.54
ABCC4O15439 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC18.44■□□□□ 0.54
ABCC4O15439 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
ABCC4O15439 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
ABCC4O15439 AC009884.2-201ENST00000603110 324 ntBASIC18.44■□□□□ 0.54
ABCC4O15439 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC18.44■□□□□ 0.54
ABCC4O15439 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ABCC4O15439 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ABCC4O15439 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ABCC4O15439 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC18.44■□□□□ 0.54
ABCC4O15439 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ABCC4O15439 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ABCC4O15439 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ABCC4O15439 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
ABCC4O15439 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC18.43■□□□□ 0.54
ABCC4O15439 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC18.43■□□□□ 0.54
ABCC4O15439 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC18.43■□□□□ 0.54
ABCC4O15439 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC18.43■□□□□ 0.54
ABCC4O15439 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ABCC4O15439 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.43■□□□□ 0.54
ABCC4O15439 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
ABCC4O15439 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ABCC4O15439 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ABCC4O15439 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ABCC4O15439 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
ABCC4O15439 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ABCC4O15439 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ABCC4O15439 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ABCC4O15439 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC18.43■□□□□ 0.54
ABCC4O15439 FGFR3P1-201ENST00000449999 601 ntBASIC18.43■□□□□ 0.54
ABCC4O15439 AC019193.1-201ENST00000506678 823 ntBASIC18.43■□□□□ 0.54
ABCC4O15439 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC18.43■□□□□ 0.54
ABCC4O15439 IQSEC3P1-201ENST00000538799 536 ntBASIC18.43■□□□□ 0.54
ABCC4O15439 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC18.43■□□□□ 0.54
ABCC4O15439 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ABCC4O15439 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ABCC4O15439 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC18.43■□□□□ 0.54
ABCC4O15439 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC18.43■□□□□ 0.54
ABCC4O15439 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC18.42■□□□□ 0.54
ABCC4O15439 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ABCC4O15439 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ABCC4O15439 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ABCC4O15439 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ABCC4O15439 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
ABCC4O15439 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
ABCC4O15439 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ABCC4O15439 AL928921.2-201ENST00000641325 2442 ntBASIC18.42■□□□□ 0.54
ABCC4O15439 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
ABCC4O15439 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ABCC4O15439 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ABCC4O15439 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
ABCC4O15439 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ABCC4O15439 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC18.42■□□□□ 0.54
ABCC4O15439 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ABCC4O15439 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ABCC4O15439 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
ABCC4O15439 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ABCC4O15439 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
ABCC4O15439 OR2R1P-201ENST00000441404 914 ntBASIC18.42■□□□□ 0.54
ABCC4O15439 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC18.42■□□□□ 0.54
ABCC4O15439 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ABCC4O15439 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC18.42■□□□□ 0.54
ABCC4O15439 IRF3-215ENST00000596822 823 ntTSL 3 BASIC18.42■□□□□ 0.54
ABCC4O15439 AP003419.4-201ENST00000616071 517 ntBASIC18.42■□□□□ 0.54
ABCC4O15439 AC133540.1-201ENST00000620845 1019 ntBASIC18.42■□□□□ 0.54
ABCC4O15439 DDX5-235ENST00000630471 473 ntTSL 4 BASIC18.42■□□□□ 0.54
ABCC4O15439 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC18.42■□□□□ 0.54
ABCC4O15439 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ABCC4O15439 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms