Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00473A8K010 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
LINC00473A8K010 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC11.93□□□□□ -0.5
LINC00473A8K010 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC11.93□□□□□ -0.5
LINC00473A8K010 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00473A8K010 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00473A8K010 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00473A8K010 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC11.93□□□□□ -0.5
LINC00473A8K010 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC11.93□□□□□ -0.5
LINC00473A8K010 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC11.93□□□□□ -0.5
LINC00473A8K010 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC11.93□□□□□ -0.5
LINC00473A8K010 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC11.93□□□□□ -0.5
LINC00473A8K010 MVK-217ENST00000639206 367 ntTSL 5 BASIC11.93□□□□□ -0.5
LINC00473A8K010 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00473A8K010 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00473A8K010 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00473A8K010 FAM90A12P-201ENST00000519497 2375 ntBASIC11.93□□□□□ -0.5
LINC00473A8K010 FAM90A24P-201ENST00000520792 2369 ntBASIC11.93□□□□□ -0.5
LINC00473A8K010 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00473A8K010 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00473A8K010 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00473A8K010 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00473A8K010 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00473A8K010 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00473A8K010 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00473A8K010 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00473A8K010 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC11.93□□□□□ -0.5
LINC00473A8K010 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00473A8K010 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00473A8K010 KRT8P28-201ENST00000433288 1390 ntBASIC11.92□□□□□ -0.5
LINC00473A8K010 AGAP10P-201ENST00000454844 2418 ntBASIC11.92□□□□□ -0.5
LINC00473A8K010 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
LINC00473A8K010 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00473A8K010 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC11.92□□□□□ -0.5
LINC00473A8K010 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00473A8K010 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC11.92□□□□□ -0.5
LINC00473A8K010 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00473A8K010 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00473A8K010 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
LINC00473A8K010 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00473A8K010 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00473A8K010 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00473A8K010 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC11.92□□□□□ -0.5
LINC00473A8K010 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00473A8K010 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00473A8K010 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00473A8K010 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00473A8K010 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
LINC00473A8K010 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
LINC00473A8K010 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00473A8K010 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
LINC00473A8K010 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00473A8K010 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00473A8K010 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00473A8K010 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00473A8K010 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC11.92□□□□□ -0.5
LINC00473A8K010 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
LINC00473A8K010 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00473A8K010 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00473A8K010 ARSEP1-201ENST00000420443 635 ntBASIC11.92□□□□□ -0.5
LINC00473A8K010 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC11.92□□□□□ -0.5
LINC00473A8K010 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00473A8K010 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00473A8K010 TERF1P3-201ENST00000505638 1227 ntBASIC11.92□□□□□ -0.5
LINC00473A8K010 AP001889.1-201ENST00000525414 633 ntBASIC11.92□□□□□ -0.5
LINC00473A8K010 AP003171.2-201ENST00000528208 925 ntBASIC11.92□□□□□ -0.5
LINC00473A8K010 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
LINC00473A8K010 AC025279.2-201ENST00000569730 653 ntBASIC11.92□□□□□ -0.5
LINC00473A8K010 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC11.92□□□□□ -0.5
LINC00473A8K010 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
LINC00473A8K010 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00473A8K010 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00473A8K010 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00473A8K010 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00473A8K010 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC11.92□□□□□ -0.5
LINC00473A8K010 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00473A8K010 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00473A8K010 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00473A8K010 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
LINC00473A8K010 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
LINC00473A8K010 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00473A8K010 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
LINC00473A8K010 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00473A8K010 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00473A8K010 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00473A8K010 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00473A8K010 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00473A8K010 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00473A8K010 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
LINC00473A8K010 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00473A8K010 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00473A8K010 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
LINC00473A8K010 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC11.92□□□□□ -0.5
LINC00473A8K010 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC11.92□□□□□ -0.5
LINC00473A8K010 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00473A8K010 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00473A8K010 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC00473A8K010 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC11.91□□□□□ -0.5
LINC00473A8K010 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00473A8K010 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms