Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 PPP1R26P4-201ENST00000619065 3527 ntBASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 HOMER2P2-201ENST00000451621 847 ntBASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AL354702.1-201ENST00000442006 1960 ntBASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 AL137784.3-201ENST00000623858 2288 ntBASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
TCRBV4S1A1TA0A5B7 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
TCRBV4S1A1TA0A5B7 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC11.83□□□□□ -0.51
TCRBV4S1A1TA0A5B7 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC020907.1-201ENST00000616460 1350 ntBASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 B9D1-203ENST00000395615 805 ntTSL 3 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 FAM8A4P-201ENST00000435433 1213 ntBASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 PFN2-215ENST00000497148 743 ntTSL 4 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms