Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 AC020914.3-201ENST00000594712 304 ntBASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 AC132192.2-201ENST00000596206 1147 ntBASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 AL590440.2-201ENST00000641973 1595 ntBASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL4A3BPQ9Y5P4 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 AC152010.1-201ENST00000415779 2006 ntBASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 NME6-203ENST00000415644 849 ntTSL 2 BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 RNMTL1P1-201ENST00000454103 560 ntBASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 AC044849.1-201ENST00000519737 1188 ntBASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 AC022748.3-201ENST00000621828 275 ntBASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 OS9-204ENST00000389146 2091 ntTSL 2 BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 KHSRPP1-201ENST00000427983 1768 ntBASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL4A3BPQ9Y5P4 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 AC138028.6-201ENST00000616106 1482 ntBASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.35■□□□□ 0.21
COL4A3BPQ9Y5P4 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms