Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
AP4S1Q9Y587 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AP4S1Q9Y587 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP4S1Q9Y587 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP4S1Q9Y587 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP4S1Q9Y587 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP4S1Q9Y587 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
AP4S1Q9Y587 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
AP4S1Q9Y587 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP4S1Q9Y587 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP4S1Q9Y587 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.89□□□□□ -0.19
AP4S1Q9Y587 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.89□□□□□ -0.19
AP4S1Q9Y587 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.89□□□□□ -0.19
AP4S1Q9Y587 AL353779.1-201ENST00000434793 351 ntBASIC13.89□□□□□ -0.19
AP4S1Q9Y587 AL591424.1-201ENST00000442569 1213 ntBASIC13.89□□□□□ -0.19
AP4S1Q9Y587 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.89□□□□□ -0.19
AP4S1Q9Y587 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.89□□□□□ -0.19
AP4S1Q9Y587 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
AP4S1Q9Y587 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.89□□□□□ -0.19
AP4S1Q9Y587 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.89□□□□□ -0.19
AP4S1Q9Y587 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.89□□□□□ -0.19
AP4S1Q9Y587 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AP4S1Q9Y587 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
AP4S1Q9Y587 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
AP4S1Q9Y587 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.89□□□□□ -0.19
AP4S1Q9Y587 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP4S1Q9Y587 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
AP4S1Q9Y587 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP4S1Q9Y587 CETN4P-206ENST00000642099 2168 ntBASIC13.89□□□□□ -0.19
AP4S1Q9Y587 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP4S1Q9Y587 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AP4S1Q9Y587 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AP4S1Q9Y587 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AP4S1Q9Y587 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP4S1Q9Y587 TUBB3P1-201ENST00000405796 1332 ntBASIC13.89□□□□□ -0.19
AP4S1Q9Y587 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AP4S1Q9Y587 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP4S1Q9Y587 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 AC131902.2-201ENST00000566892 2172 ntBASIC13.88□□□□□ -0.19
AP4S1Q9Y587 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 FAM58DP-201ENST00000428076 619 ntBASIC13.88□□□□□ -0.19
AP4S1Q9Y587 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 KRT18P3-201ENST00000451602 1288 ntBASIC13.88□□□□□ -0.19
AP4S1Q9Y587 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 KRT18P56-201ENST00000507275 550 ntBASIC13.88□□□□□ -0.19
AP4S1Q9Y587 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 SLC25A6P4-201ENST00000586535 553 ntBASIC13.88□□□□□ -0.19
AP4S1Q9Y587 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 AGAP12P-201ENST00000585227 2359 ntBASIC13.88□□□□□ -0.19
AP4S1Q9Y587 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 MRPL37P1-201ENST00000592451 1337 ntBASIC13.88□□□□□ -0.19
AP4S1Q9Y587 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
AP4S1Q9Y587 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.87□□□□□ -0.19
AP4S1Q9Y587 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms