Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.33□□□□□ -0.43
KCNIP3Q9Y2W7 AL158070.2-201ENST00000623713 1621 ntBASIC12.33□□□□□ -0.43
KCNIP3Q9Y2W7 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.33□□□□□ -0.43
KCNIP3Q9Y2W7 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 AC010336.1-201ENST00000539278 4739 ntBASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 NUS1P3-201ENST00000423502 862 ntBASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 SDHAP3-202ENST00000515467 728 ntBASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 TIMM17BP1-201ENST00000545713 516 ntBASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 MIR4453-201ENST00000584019 89 ntBASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 AC004461.2-201ENST00000629517 803 ntBASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 AC090114.2-201ENST00000608477 7054 ntBASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 FAM90A12P-201ENST00000519497 2375 ntBASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 FAM90A24P-201ENST00000520792 2369 ntBASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP3Q9Y2W7 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 KRT8P14-201ENST00000414254 1442 ntBASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 AL080243.2-201ENST00000418783 582 ntBASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 AL590627.1-203ENST00000421194 1026 ntBASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 FAM58DP-201ENST00000428076 619 ntBASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 HLA-K-203ENST00000430151 1046 ntBASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 HTR5BP-201ENST00000430851 1154 ntBASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 AC009078.2-202ENST00000463353 338 ntBASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 AC022145.2-201ENST00000598203 171 ntBASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 MTDHP5-201ENST00000598980 586 ntBASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms