Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC16.58■□□□□ 0.24
HDAC6Q9UBN7 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HDAC6Q9UBN7 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.57■□□□□ 0.24
HDAC6Q9UBN7 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HDAC6Q9UBN7 REXO1L2P-201ENST00000425429 2069 ntBASIC16.57■□□□□ 0.24
HDAC6Q9UBN7 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HDAC6Q9UBN7 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HDAC6Q9UBN7 AL157791.1-201ENST00000553667 1699 ntBASIC16.57■□□□□ 0.24
HDAC6Q9UBN7 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.57■□□□□ 0.24
HDAC6Q9UBN7 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HDAC6Q9UBN7 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HDAC6Q9UBN7 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HDAC6Q9UBN7 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HDAC6Q9UBN7 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.57■□□□□ 0.24
HDAC6Q9UBN7 FXNP2-201ENST00000411625 547 ntBASIC16.57■□□□□ 0.24
HDAC6Q9UBN7 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.57■□□□□ 0.24
HDAC6Q9UBN7 KLF2P1-201ENST00000447438 1042 ntBASIC16.57■□□□□ 0.24
HDAC6Q9UBN7 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.57■□□□□ 0.24
HDAC6Q9UBN7 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC16.57■□□□□ 0.24
HDAC6Q9UBN7 AL160314.3-201ENST00000556041 767 ntBASIC16.57■□□□□ 0.24
HDAC6Q9UBN7 SNORD3B-2-202ENST00000571722 791 ntBASIC16.57■□□□□ 0.24
HDAC6Q9UBN7 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HDAC6Q9UBN7 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HDAC6Q9UBN7 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HDAC6Q9UBN7 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16.57■□□□□ 0.24
HDAC6Q9UBN7 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.57■□□□□ 0.24
HDAC6Q9UBN7 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.57■□□□□ 0.24
HDAC6Q9UBN7 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HDAC6Q9UBN7 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HDAC6Q9UBN7 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.57■□□□□ 0.24
HDAC6Q9UBN7 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HDAC6Q9UBN7 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.57■□□□□ 0.24
HDAC6Q9UBN7 C1R-201ENST00000535233 2211 ntTSL 2 BASIC16.57■□□□□ 0.24
HDAC6Q9UBN7 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.57■□□□□ 0.24
HDAC6Q9UBN7 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.57■□□□□ 0.24
HDAC6Q9UBN7 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HDAC6Q9UBN7 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 AL928921.2-201ENST00000641325 2442 ntBASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 WASH3P-207ENST00000560956 1394 ntBASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 AC018529.2-202ENST00000611482 3087 ntBASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 AP000845.1-201ENST00000581677 2131 ntBASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 PCDHA3-202ENST00000532566 4594 ntBASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 FLJ16779-201ENST00000612722 7638 ntBASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDAC6Q9UBN7 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms