Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 DFFBP1-201ENST00000433250 979 ntBASIC13.87□□□□□ -0.19
VAPAQ9P0L0 AC093433.1-201ENST00000458048 571 ntBASIC13.87□□□□□ -0.19
VAPAQ9P0L0 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 AC022137.2-201ENST00000503482 481 ntBASIC13.87□□□□□ -0.19
VAPAQ9P0L0 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAPAQ9P0L0 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 AC245100.3-201ENST00000441281 285 ntBASIC13.86□□□□□ -0.19
VAPAQ9P0L0 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 ALG3P1-201ENST00000508806 1114 ntBASIC13.86□□□□□ -0.19
VAPAQ9P0L0 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 CHCHD2P3-201ENST00000603038 451 ntBASIC13.86□□□□□ -0.19
VAPAQ9P0L0 AC138466.3-201ENST00000619983 221 ntBASIC13.86□□□□□ -0.19
VAPAQ9P0L0 AL359183.1-201ENST00000623796 2132 ntBASIC13.86□□□□□ -0.19
VAPAQ9P0L0 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 FKBP4P6-201ENST00000457486 1332 ntBASIC13.86□□□□□ -0.19
VAPAQ9P0L0 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
VAPAQ9P0L0 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms