Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 RNU6-362P-201ENST00000516736 90 ntBASIC17.57■□□□□ 0.4
RTN4Q9NQC3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 AC005520.3-201ENST00000602874 370 ntBASIC17.57■□□□□ 0.4
RTN4Q9NQC3 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 POLR3E-219ENST00000615879 3655 ntTSL 2 BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 AL022323.5-201ENST00000624101 2059 ntBASIC17.57■□□□□ 0.4
RTN4Q9NQC3 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 TMEM150C-204ENST00000515780 3296 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTN4Q9NQC3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 CNN2-207ENST00000565096 2109 ntTSL 2 BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 AC002090.1-201ENST00000625000 2138 ntBASIC17.56■□□□□ 0.4
RTN4Q9NQC3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 BCAR1-209ENST00000546196 1340 ntBASIC17.56■□□□□ 0.4
RTN4Q9NQC3 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 AC004870.1-201ENST00000315132 882 ntBASIC17.56■□□□□ 0.4
RTN4Q9NQC3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 AL391647.1-201ENST00000395664 511 ntBASIC17.56■□□□□ 0.4
RTN4Q9NQC3 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 ALKBH2-202ENST00000429722 1159 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 FAAHP1-202ENST00000446499 1238 ntBASIC17.56■□□□□ 0.4
RTN4Q9NQC3 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 KRT19P2-202ENST00000557173 1012 ntBASIC17.56■□□□□ 0.4
RTN4Q9NQC3 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 AC092337.1-201ENST00000568699 1129 ntBASIC17.56■□□□□ 0.4
RTN4Q9NQC3 AP005901.4-201ENST00000577336 569 ntBASIC17.56■□□□□ 0.4
RTN4Q9NQC3 AL021368.1-201ENST00000607490 540 ntBASIC17.56■□□□□ 0.4
RTN4Q9NQC3 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 SPOCK3-203ENST00000421836 3061 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 SLC25A25-204ENST00000373069 3376 ntTSL 5 BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 EPN3-201ENST00000268933 4071 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 ZNF25-201ENST00000302609 4139 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTN4Q9NQC3 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 GADL1-201ENST00000282538 3759 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 LRFN3-204ENST00000588831 3689 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 AC111170.3-201ENST00000624282 2464 ntBASIC17.55■□□□□ 0.4
RTN4Q9NQC3 CYP39A1-201ENST00000275016 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 TBC1D29-202ENST00000580161 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 FABP5-201ENST00000297258 851 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTN4Q9NQC3 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms