Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 API5-211ENST00000534695 560 ntTSL 5 BASIC12.89□□□□□ -0.35
ELL3Q9HB65 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ELL3Q9HB65 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ELL3Q9HB65 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
ELL3Q9HB65 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ELL3Q9HB65 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ELL3Q9HB65 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.89□□□□□ -0.35
ELL3Q9HB65 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ELL3Q9HB65 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
ELL3Q9HB65 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ELL3Q9HB65 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ELL3Q9HB65 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ELL3Q9HB65 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ELL3Q9HB65 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
ELL3Q9HB65 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ELL3Q9HB65 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ELL3Q9HB65 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ELL3Q9HB65 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ELL3Q9HB65 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.89□□□□□ -0.35
ELL3Q9HB65 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ELL3Q9HB65 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ELL3Q9HB65 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
ELL3Q9HB65 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.89□□□□□ -0.35
ELL3Q9HB65 AC136759.1-202ENST00000530858 2194 ntBASIC12.88□□□□□ -0.35
ELL3Q9HB65 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.88□□□□□ -0.35
ELL3Q9HB65 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.88□□□□□ -0.35
ELL3Q9HB65 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ELL3Q9HB65 AC093525.8-201ENST00000624099 1342 ntBASIC12.88□□□□□ -0.35
ELL3Q9HB65 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.88□□□□□ -0.35
ELL3Q9HB65 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
ELL3Q9HB65 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
ELL3Q9HB65 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
ELL3Q9HB65 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ELL3Q9HB65 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ELL3Q9HB65 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.88□□□□□ -0.35
ELL3Q9HB65 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ELL3Q9HB65 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ELL3Q9HB65 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ELL3Q9HB65 AC041040.2-201ENST00000622926 2899 ntBASIC12.88□□□□□ -0.35
ELL3Q9HB65 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.88□□□□□ -0.35
ELL3Q9HB65 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.88□□□□□ -0.35
ELL3Q9HB65 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ELL3Q9HB65 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ELL3Q9HB65 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ELL3Q9HB65 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
ELL3Q9HB65 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.88□□□□□ -0.35
ELL3Q9HB65 CALY-203ENST00000368558 825 ntTSL 5 BASIC12.88□□□□□ -0.35
ELL3Q9HB65 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC12.88□□□□□ -0.35
ELL3Q9HB65 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.88□□□□□ -0.35
ELL3Q9HB65 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ELL3Q9HB65 AL645937.2-201ENST00000396808 931 ntBASIC12.88□□□□□ -0.35
ELL3Q9HB65 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.88□□□□□ -0.35
ELL3Q9HB65 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.88□□□□□ -0.35
ELL3Q9HB65 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
ELL3Q9HB65 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ELL3Q9HB65 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.88□□□□□ -0.35
ELL3Q9HB65 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC12.88□□□□□ -0.35
ELL3Q9HB65 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.88□□□□□ -0.35
ELL3Q9HB65 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.88□□□□□ -0.35
ELL3Q9HB65 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.88□□□□□ -0.35
ELL3Q9HB65 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.88□□□□□ -0.35
ELL3Q9HB65 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.88□□□□□ -0.35
ELL3Q9HB65 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.88□□□□□ -0.35
ELL3Q9HB65 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.88□□□□□ -0.35
ELL3Q9HB65 BX539320.1-201ENST00000623759 877 ntBASIC12.88□□□□□ -0.35
ELL3Q9HB65 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ELL3Q9HB65 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
ELL3Q9HB65 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
ELL3Q9HB65 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ELL3Q9HB65 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.88□□□□□ -0.35
ELL3Q9HB65 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.88□□□□□ -0.35
ELL3Q9HB65 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.88□□□□□ -0.35
ELL3Q9HB65 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ELL3Q9HB65 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ELL3Q9HB65 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.88□□□□□ -0.35
ELL3Q9HB65 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ELL3Q9HB65 CIC-204ENST00000572681 8218 ntTSL 5 BASIC12.88□□□□□ -0.35
ELL3Q9HB65 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ELL3Q9HB65 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
ELL3Q9HB65 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ELL3Q9HB65 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ELL3Q9HB65 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.88□□□□□ -0.35
ELL3Q9HB65 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ELL3Q9HB65 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ELL3Q9HB65 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ELL3Q9HB65 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ELL3Q9HB65 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.88□□□□□ -0.35
ELL3Q9HB65 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ELL3Q9HB65 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC12.88□□□□□ -0.35
ELL3Q9HB65 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ELL3Q9HB65 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ELL3Q9HB65 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
ELL3Q9HB65 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.87□□□□□ -0.35
ELL3Q9HB65 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
ELL3Q9HB65 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
ELL3Q9HB65 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ELL3Q9HB65 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
ELL3Q9HB65 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ELL3Q9HB65 AL354702.1-201ENST00000442006 1960 ntBASIC12.87□□□□□ -0.35
ELL3Q9HB65 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms