Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 RPS15-201ENST00000233609 534 ntTSL 2 BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 KRT18P13-201ENST00000400056 1290 ntBASIC18.05■□□□□ 0.48
UPF2Q9HAU5 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 VDAC1P7-201ENST00000462417 847 ntBASIC18.05■□□□□ 0.48
UPF2Q9HAU5 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 RPS15-205ENST00000586686 562 ntTSL 5 BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 RPS15-208ENST00000591804 711 ntTSL 5 BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 Z92544.3-201ENST00000624747 417 ntBASIC18.05■□□□□ 0.48
UPF2Q9HAU5 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 AC003102.2-201ENST00000589195 1469 ntBASIC18.05■□□□□ 0.48
UPF2Q9HAU5 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 MIR497HG-202ENST00000572453 3838 ntBASIC18.05■□□□□ 0.48
UPF2Q9HAU5 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UPF2Q9HAU5 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UPF2Q9HAU5 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
UPF2Q9HAU5 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
UPF2Q9HAU5 COL6A4P2-202ENST00000504443 2753 ntBASIC18.04■□□□□ 0.48
UPF2Q9HAU5 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
UPF2Q9HAU5 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPF2Q9HAU5 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
UPF2Q9HAU5 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UPF2Q9HAU5 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
UPF2Q9HAU5 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
UPF2Q9HAU5 AC107890.1-201ENST00000422478 521 ntBASIC18.04■□□□□ 0.48
UPF2Q9HAU5 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.04■□□□□ 0.48
UPF2Q9HAU5 HLA-J-203ENST00000494367 1087 ntBASIC18.04■□□□□ 0.48
UPF2Q9HAU5 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.04■□□□□ 0.48
UPF2Q9HAU5 AC140878.1-201ENST00000565277 250 ntBASIC18.04■□□□□ 0.48
UPF2Q9HAU5 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.04■□□□□ 0.48
UPF2Q9HAU5 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.04■□□□□ 0.48
UPF2Q9HAU5 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.04■□□□□ 0.48
UPF2Q9HAU5 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPF2Q9HAU5 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC18.04■□□□□ 0.48
UPF2Q9HAU5 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPF2Q9HAU5 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPF2Q9HAU5 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPF2Q9HAU5 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
UPF2Q9HAU5 AC027612.1-201ENST00000445234 2395 ntBASIC18.04■□□□□ 0.48
UPF2Q9HAU5 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPF2Q9HAU5 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC18.04■□□□□ 0.48
UPF2Q9HAU5 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPF2Q9HAU5 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UPF2Q9HAU5 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UPF2Q9HAU5 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPF2Q9HAU5 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
UPF2Q9HAU5 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UPF2Q9HAU5 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
UPF2Q9HAU5 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UPF2Q9HAU5 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms