Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
POLR2J2Q9GZM3 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.62□□□□□ -0.23
POLR2J2Q9GZM3 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
POLR2J2Q9GZM3 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.62□□□□□ -0.23
POLR2J2Q9GZM3 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.62□□□□□ -0.23
POLR2J2Q9GZM3 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.62□□□□□ -0.23
POLR2J2Q9GZM3 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.62□□□□□ -0.23
POLR2J2Q9GZM3 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.62□□□□□ -0.23
POLR2J2Q9GZM3 PPT1-213ENST00000641319 2388 ntBASIC13.62□□□□□ -0.23
POLR2J2Q9GZM3 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
POLR2J2Q9GZM3 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
POLR2J2Q9GZM3 RN7SL832P-201ENST00000607781 1756 ntBASIC13.62□□□□□ -0.23
POLR2J2Q9GZM3 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.62□□□□□ -0.23
POLR2J2Q9GZM3 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
POLR2J2Q9GZM3 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.62□□□□□ -0.23
POLR2J2Q9GZM3 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.62□□□□□ -0.23
POLR2J2Q9GZM3 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.62□□□□□ -0.23
POLR2J2Q9GZM3 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
POLR2J2Q9GZM3 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
POLR2J2Q9GZM3 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
POLR2J2Q9GZM3 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 MYCLP2-201ENST00000449268 967 ntBASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 AC138761.1-201ENST00000584393 385 ntBASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 AC138696.2-201ENST00000607376 223 ntBASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
POLR2J2Q9GZM3 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 AC005562.1-201ENST00000583030 3219 ntBASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR2J2Q9GZM3 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms