Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TRIM4Q9C037 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM4Q9C037 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC14.83□□□□□ -0.04
TRIM4Q9C037 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.83□□□□□ -0.04
TRIM4Q9C037 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM4Q9C037 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM4Q9C037 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM4Q9C037 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM4Q9C037 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM4Q9C037 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.83□□□□□ -0.04
TRIM4Q9C037 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM4Q9C037 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM4Q9C037 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM4Q9C037 AC126365.1-201ENST00000578585 1514 ntBASIC14.82□□□□□ -0.04
TRIM4Q9C037 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM4Q9C037 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM4Q9C037 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM4Q9C037 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM4Q9C037 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM4Q9C037 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM4Q9C037 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM4Q9C037 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM4Q9C037 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM4Q9C037 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM4Q9C037 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM4Q9C037 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM4Q9C037 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM4Q9C037 MIR1247-201ENST00000408206 136 ntBASIC14.82□□□□□ -0.04
TRIM4Q9C037 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 AC074338.1-201ENST00000416825 156 ntBASIC14.82□□□□□ -0.04
TRIM4Q9C037 MEP1AP4-201ENST00000423244 1087 ntBASIC14.82□□□□□ -0.04
TRIM4Q9C037 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 FAM21FP-201ENST00000426241 1131 ntBASIC14.82□□□□□ -0.04
TRIM4Q9C037 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 USP32P1-208ENST00000506594 1164 ntBASIC14.82□□□□□ -0.04
TRIM4Q9C037 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM4Q9C037 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM4Q9C037 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM4Q9C037 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 AL591122.2-201ENST00000624125 1853 ntBASIC14.82□□□□□ -0.04
TRIM4Q9C037 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM4Q9C037 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM4Q9C037 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM4Q9C037 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM4Q9C037 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 AC004899.2-201ENST00000622993 3860 ntBASIC14.82□□□□□ -0.04
TRIM4Q9C037 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 AC019294.4-201ENST00000561777 2905 ntBASIC14.82□□□□□ -0.04
TRIM4Q9C037 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM4Q9C037 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.81□□□□□ -0.04
TRIM4Q9C037 AC011474.4-201ENST00000623523 2076 ntBASIC14.81□□□□□ -0.04
TRIM4Q9C037 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
TRIM4Q9C037 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM4Q9C037 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM4Q9C037 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM4Q9C037 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM4Q9C037 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRIM4Q9C037 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM4Q9C037 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TRIM4Q9C037 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRIM4Q9C037 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.81□□□□□ -0.04
TRIM4Q9C037 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TRIM4Q9C037 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
TRIM4Q9C037 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.81□□□□□ -0.04
TRIM4Q9C037 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
TRIM4Q9C037 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.81□□□□□ -0.04
TRIM4Q9C037 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms