Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC17.48■□□□□ 0.39
RTFDC1Q9BY42 OR2A1-AS1-210ENST00000496968 531 ntBASIC17.48■□□□□ 0.39
RTFDC1Q9BY42 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC17.48■□□□□ 0.39
RTFDC1Q9BY42 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC17.48■□□□□ 0.39
RTFDC1Q9BY42 AL021707.6-201ENST00000609212 491 ntBASIC17.48■□□□□ 0.39
RTFDC1Q9BY42 ST5-261ENST00000626808 1071 ntTSL 5 BASIC17.48■□□□□ 0.39
RTFDC1Q9BY42 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RTFDC1Q9BY42 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC17.48■□□□□ 0.39
RTFDC1Q9BY42 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTFDC1Q9BY42 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RTFDC1Q9BY42 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.48■□□□□ 0.39
RTFDC1Q9BY42 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTFDC1Q9BY42 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTFDC1Q9BY42 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RTFDC1Q9BY42 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RTFDC1Q9BY42 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTFDC1Q9BY42 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTFDC1Q9BY42 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RTFDC1Q9BY42 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.48■□□□□ 0.39
RTFDC1Q9BY42 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTFDC1Q9BY42 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTFDC1Q9BY42 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RTFDC1Q9BY42 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 AL161932.2-201ENST00000435436 679 ntBASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 SNORD3B-1-201ENST00000577988 758 ntBASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTFDC1Q9BY42 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
RTFDC1Q9BY42 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
RTFDC1Q9BY42 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RTFDC1Q9BY42 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
RTFDC1Q9BY42 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.46■□□□□ 0.39
RTFDC1Q9BY42 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC17.46■□□□□ 0.39
RTFDC1Q9BY42 BX679664.3-201ENST00000414070 555 ntBASIC17.46■□□□□ 0.39
RTFDC1Q9BY42 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTFDC1Q9BY42 AC113935.1-201ENST00000471722 555 ntBASIC17.46■□□□□ 0.39
RTFDC1Q9BY42 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC17.46■□□□□ 0.39
RTFDC1Q9BY42 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTFDC1Q9BY42 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC17.46■□□□□ 0.39
RTFDC1Q9BY42 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
RTFDC1Q9BY42 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC17.46■□□□□ 0.39
RTFDC1Q9BY42 SORD2P-201ENST00000558556 1069 ntBASIC17.46■□□□□ 0.39
RTFDC1Q9BY42 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC17.46■□□□□ 0.39
RTFDC1Q9BY42 THY1-209ENST00000580275 578 ntTSL 3 BASIC17.46■□□□□ 0.39
RTFDC1Q9BY42 MIR6746-201ENST00000620971 63 ntBASIC17.46■□□□□ 0.39
RTFDC1Q9BY42 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC17.46■□□□□ 0.39
RTFDC1Q9BY42 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RTFDC1Q9BY42 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTFDC1Q9BY42 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.46■□□□□ 0.39
RTFDC1Q9BY42 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RTFDC1Q9BY42 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTFDC1Q9BY42 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTFDC1Q9BY42 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTFDC1Q9BY42 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTFDC1Q9BY42 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RTFDC1Q9BY42 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.46■□□□□ 0.38
RTFDC1Q9BY42 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RTFDC1Q9BY42 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RTFDC1Q9BY42 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC17.46■□□□□ 0.38
RTFDC1Q9BY42 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
RTFDC1Q9BY42 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.46■□□□□ 0.38
RTFDC1Q9BY42 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTFDC1Q9BY42 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms