Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 AP001002.3-201ENST00000623482 206 ntBASIC14.3□□□□□ -0.12
EBF4Q9BQW3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 AC004899.2-201ENST00000622993 3860 ntBASIC14.3□□□□□ -0.12
EBF4Q9BQW3 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 BTBD7P1-201ENST00000447253 1453 ntBASIC14.3□□□□□ -0.12
EBF4Q9BQW3 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 AL928654.5-201ENST00000624831 2501 ntBASIC14.29□□□□□ -0.12
EBF4Q9BQW3 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 KLF2P2-201ENST00000416807 1039 ntBASIC14.29□□□□□ -0.12
EBF4Q9BQW3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 AC107890.1-201ENST00000422478 521 ntBASIC14.29□□□□□ -0.12
EBF4Q9BQW3 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 GIMAP3P-201ENST00000495150 836 ntBASIC14.29□□□□□ -0.12
EBF4Q9BQW3 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 AP001582.1-201ENST00000525856 295 ntBASIC14.29□□□□□ -0.12
EBF4Q9BQW3 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 AC007431.3-201ENST00000623221 587 ntBASIC14.29□□□□□ -0.12
EBF4Q9BQW3 AC004840.1-201ENST00000636359 365 ntBASIC14.29□□□□□ -0.12
EBF4Q9BQW3 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 AL022313.4-201ENST00000562756 2046 ntBASIC14.29□□□□□ -0.12
EBF4Q9BQW3 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EBF4Q9BQW3 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms