Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CSPG4P5Q96PW8 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CSPG4P5Q96PW8 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
CSPG4P5Q96PW8 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CSPG4P5Q96PW8 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
CSPG4P5Q96PW8 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CSPG4P5Q96PW8 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CSPG4P5Q96PW8 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.07■□□□□ 0
CSPG4P5Q96PW8 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.07■□□□□ 0
CSPG4P5Q96PW8 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CSPG4P5Q96PW8 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.07■□□□□ 0
CSPG4P5Q96PW8 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.07■□□□□ 0
CSPG4P5Q96PW8 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CSPG4P5Q96PW8 AC104506.1-201ENST00000609247 429 ntBASIC15.07■□□□□ 0
CSPG4P5Q96PW8 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.07■□□□□ 0
CSPG4P5Q96PW8 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CSPG4P5Q96PW8 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CSPG4P5Q96PW8 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.07■□□□□ 0
CSPG4P5Q96PW8 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CSPG4P5Q96PW8 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CSPG4P5Q96PW8 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
CSPG4P5Q96PW8 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.07■□□□□ 0
CSPG4P5Q96PW8 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.07■□□□□ 0
CSPG4P5Q96PW8 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CSPG4P5Q96PW8 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CSPG4P5Q96PW8 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.07■□□□□ 0
CSPG4P5Q96PW8 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CSPG4P5Q96PW8 AC041040.2-201ENST00000622926 2899 ntBASIC15.07■□□□□ 0
CSPG4P5Q96PW8 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 KLF2P1-201ENST00000447438 1042 ntBASIC15.06■□□□□ 0
CSPG4P5Q96PW8 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 AL162426.1-201ENST00000624141 743 ntBASIC15.06■□□□□ 0
CSPG4P5Q96PW8 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 AL008718.2-201ENST00000609206 1313 ntBASIC15.06■□□□□ 0
CSPG4P5Q96PW8 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSPG4P5Q96PW8 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CSPG4P5Q96PW8 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CSPG4P5Q96PW8 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
CSPG4P5Q96PW8 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CSPG4P5Q96PW8 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.05■□□□□ 0
CSPG4P5Q96PW8 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.05■□□□□ 0
CSPG4P5Q96PW8 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.05■□□□□ 0
CSPG4P5Q96PW8 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.05■□□□□ 0
CSPG4P5Q96PW8 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CSPG4P5Q96PW8 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.05■□□□□ -0
CSPG4P5Q96PW8 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.05■□□□□ -0
CSPG4P5Q96PW8 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.05■□□□□ -0
CSPG4P5Q96PW8 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.05■□□□□ -0
CSPG4P5Q96PW8 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.05■□□□□ -0
CSPG4P5Q96PW8 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.05■□□□□ -0
CSPG4P5Q96PW8 AL354877.1-201ENST00000424412 413 ntBASIC15.05■□□□□ -0
CSPG4P5Q96PW8 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CSPG4P5Q96PW8 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.05■□□□□ -0
CSPG4P5Q96PW8 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.05■□□□□ -0
CSPG4P5Q96PW8 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.05■□□□□ -0
CSPG4P5Q96PW8 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.05■□□□□ -0
CSPG4P5Q96PW8 AC009542.2-202ENST00000619004 1067 ntBASIC15.05■□□□□ -0
CSPG4P5Q96PW8 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.05■□□□□ -0
CSPG4P5Q96PW8 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.05■□□□□ -0
CSPG4P5Q96PW8 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CSPG4P5Q96PW8 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.05■□□□□ -0
CSPG4P5Q96PW8 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.05■□□□□ -0
CSPG4P5Q96PW8 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.05■□□□□ -0
CSPG4P5Q96PW8 AC011474.4-201ENST00000623523 2076 ntBASIC15.05■□□□□ -0
CSPG4P5Q96PW8 MST1P2-201ENST00000457982 2291 ntBASIC15.05■□□□□ -0
CSPG4P5Q96PW8 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.05■□□□□ -0
CSPG4P5Q96PW8 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms