Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
RNF31Q96EP0 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.21□□□□□ -0.13
RNF31Q96EP0 RN7SKP175-201ENST00000408472 289 ntBASIC14.21□□□□□ -0.13
RNF31Q96EP0 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.21□□□□□ -0.13
RNF31Q96EP0 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.21□□□□□ -0.13
RNF31Q96EP0 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.21□□□□□ -0.13
RNF31Q96EP0 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.21□□□□□ -0.13
RNF31Q96EP0 KLF2P1-201ENST00000447438 1042 ntBASIC14.21□□□□□ -0.13
RNF31Q96EP0 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.21□□□□□ -0.13
RNF31Q96EP0 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.21□□□□□ -0.13
RNF31Q96EP0 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.21□□□□□ -0.13
RNF31Q96EP0 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.21□□□□□ -0.13
RNF31Q96EP0 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.21□□□□□ -0.13
RNF31Q96EP0 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.21□□□□□ -0.13
RNF31Q96EP0 FGFR3P5-201ENST00000564496 886 ntBASIC14.21□□□□□ -0.13
RNF31Q96EP0 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RNF31Q96EP0 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.21□□□□□ -0.13
RNF31Q96EP0 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.21□□□□□ -0.13
RNF31Q96EP0 AC091544.8-201ENST00000619490 361 ntBASIC14.21□□□□□ -0.13
RNF31Q96EP0 AC015967.2-201ENST00000624092 234 ntBASIC14.21□□□□□ -0.13
RNF31Q96EP0 AC006435.4-201ENST00000625037 234 ntBASIC14.21□□□□□ -0.13
RNF31Q96EP0 AL356737.1-201ENST00000634391 234 ntBASIC14.21□□□□□ -0.13
RNF31Q96EP0 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.21□□□□□ -0.13
RNF31Q96EP0 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.21□□□□□ -0.13
RNF31Q96EP0 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF31Q96EP0 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
RNF31Q96EP0 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF31Q96EP0 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.21□□□□□ -0.13
RNF31Q96EP0 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF31Q96EP0 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RNF31Q96EP0 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RNF31Q96EP0 AC023090.2-201ENST00000625182 2110 ntBASIC14.21□□□□□ -0.13
RNF31Q96EP0 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.21□□□□□ -0.13
RNF31Q96EP0 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RNF31Q96EP0 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RNF31Q96EP0 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.21□□□□□ -0.14
RNF31Q96EP0 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RNF31Q96EP0 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
RNF31Q96EP0 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RNF31Q96EP0 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.21□□□□□ -0.14
RNF31Q96EP0 LILRP1-201ENST00000444199 1370 ntBASIC14.21□□□□□ -0.14
RNF31Q96EP0 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RNF31Q96EP0 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
RNF31Q96EP0 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RNF31Q96EP0 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
RNF31Q96EP0 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF31Q96EP0 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF31Q96EP0 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
RNF31Q96EP0 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
RNF31Q96EP0 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.2□□□□□ -0.14
RNF31Q96EP0 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF31Q96EP0 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.2□□□□□ -0.14
RNF31Q96EP0 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
RNF31Q96EP0 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF31Q96EP0 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.2□□□□□ -0.14
RNF31Q96EP0 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
RNF31Q96EP0 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF31Q96EP0 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF31Q96EP0 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF31Q96EP0 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RNF31Q96EP0 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF31Q96EP0 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF31Q96EP0 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF31Q96EP0 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF31Q96EP0 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF31Q96EP0 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF31Q96EP0 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RNF31Q96EP0 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
RNF31Q96EP0 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC14.2□□□□□ -0.14
RNF31Q96EP0 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.2□□□□□ -0.14
RNF31Q96EP0 AL354877.1-201ENST00000424412 413 ntBASIC14.2□□□□□ -0.14
RNF31Q96EP0 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF31Q96EP0 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.2□□□□□ -0.14
RNF31Q96EP0 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RNF31Q96EP0 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.2□□□□□ -0.14
RNF31Q96EP0 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.2□□□□□ -0.14
RNF31Q96EP0 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.2□□□□□ -0.14
RNF31Q96EP0 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC14.2□□□□□ -0.14
RNF31Q96EP0 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.2□□□□□ -0.14
RNF31Q96EP0 CHMP4BP1-201ENST00000556017 588 ntBASIC14.2□□□□□ -0.14
RNF31Q96EP0 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.2□□□□□ -0.14
RNF31Q96EP0 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF31Q96EP0 AC138649.2-201ENST00000615886 705 ntBASIC14.2□□□□□ -0.14
RNF31Q96EP0 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF31Q96EP0 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
RNF31Q96EP0 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.2□□□□□ -0.14
RNF31Q96EP0 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF31Q96EP0 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF31Q96EP0 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
RNF31Q96EP0 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF31Q96EP0 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF31Q96EP0 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF31Q96EP0 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF31Q96EP0 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF31Q96EP0 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.2□□□□□ -0.14
RNF31Q96EP0 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.2□□□□□ -0.14
RNF31Q96EP0 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
RNF31Q96EP0 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.2□□□□□ -0.14
RNF31Q96EP0 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF31Q96EP0 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms