Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
STAG1Q8WVM7 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC17.16■□□□□ 0.34
STAG1Q8WVM7 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.16■□□□□ 0.34
STAG1Q8WVM7 AC092299.1-201ENST00000632679 757 ntBASIC17.16■□□□□ 0.34
STAG1Q8WVM7 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
STAG1Q8WVM7 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
STAG1Q8WVM7 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
STAG1Q8WVM7 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
STAG1Q8WVM7 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
STAG1Q8WVM7 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
STAG1Q8WVM7 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
STAG1Q8WVM7 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
STAG1Q8WVM7 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
STAG1Q8WVM7 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
STAG1Q8WVM7 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 USP28-214ENST00000545540 3431 ntTSL 2 BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 SPTLC1P5-201ENST00000450718 252 ntBASIC17.15■□□□□ 0.34
STAG1Q8WVM7 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 RCC2P8-201ENST00000502779 1035 ntBASIC17.15■□□□□ 0.34
STAG1Q8WVM7 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 RN7SL774P-201ENST00000577467 290 ntBASIC17.15■□□□□ 0.34
STAG1Q8WVM7 MIR3619-201ENST00000579667 83 ntBASIC17.15■□□□□ 0.34
STAG1Q8WVM7 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 AL157813.1-201ENST00000612996 587 ntBASIC17.15■□□□□ 0.34
STAG1Q8WVM7 AL021578.1-201ENST00000613646 709 ntBASIC17.15■□□□□ 0.34
STAG1Q8WVM7 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 AC068587.10-201ENST00000641210 219 ntBASIC17.15■□□□□ 0.34
STAG1Q8WVM7 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
STAG1Q8WVM7 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
STAG1Q8WVM7 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
STAG1Q8WVM7 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC17.14■□□□□ 0.33
STAG1Q8WVM7 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
STAG1Q8WVM7 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
STAG1Q8WVM7 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
STAG1Q8WVM7 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC17.14■□□□□ 0.33
STAG1Q8WVM7 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
STAG1Q8WVM7 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
STAG1Q8WVM7 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
STAG1Q8WVM7 AC067930.6-201ENST00000623257 4947 ntBASIC17.14■□□□□ 0.33
STAG1Q8WVM7 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.14■□□□□ 0.33
STAG1Q8WVM7 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
STAG1Q8WVM7 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC17.14■□□□□ 0.33
STAG1Q8WVM7 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.14■□□□□ 0.33
STAG1Q8WVM7 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
STAG1Q8WVM7 MIR769-201ENST00000390225 118 ntBASIC17.14■□□□□ 0.33
STAG1Q8WVM7 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
STAG1Q8WVM7 AL662890.1-201ENST00000396818 632 ntBASIC17.14■□□□□ 0.33
STAG1Q8WVM7 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC17.14■□□□□ 0.33
STAG1Q8WVM7 AC011742.3-201ENST00000439053 820 ntBASIC17.14■□□□□ 0.33
STAG1Q8WVM7 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
STAG1Q8WVM7 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
STAG1Q8WVM7 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.14■□□□□ 0.33
STAG1Q8WVM7 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
STAG1Q8WVM7 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
STAG1Q8WVM7 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC17.14■□□□□ 0.33
STAG1Q8WVM7 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC17.14■□□□□ 0.33
STAG1Q8WVM7 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
STAG1Q8WVM7 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.14■□□□□ 0.33
STAG1Q8WVM7 AC100757.4-201ENST00000626934 759 ntBASIC17.14■□□□□ 0.33
STAG1Q8WVM7 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
STAG1Q8WVM7 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
STAG1Q8WVM7 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
STAG1Q8WVM7 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
STAG1Q8WVM7 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
STAG1Q8WVM7 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
STAG1Q8WVM7 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms