Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 PCDHA6-201ENST00000378126 3267 ntBASIC12.23□□□□□ -0.45
ZNF546Q86UE3 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 AL355306.1-201ENST00000415580 579 ntBASIC12.23□□□□□ -0.45
ZNF546Q86UE3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 AL691432.3-201ENST00000621860 400 ntBASIC12.23□□□□□ -0.45
ZNF546Q86UE3 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 AC022497.1-201ENST00000624916 3691 ntBASIC12.23□□□□□ -0.45
ZNF546Q86UE3 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 AC107375.1-201ENST00000564464 2231 ntBASIC12.23□□□□□ -0.45
ZNF546Q86UE3 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ZNF546Q86UE3 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 AC022400.8-201ENST00000623453 3599 ntBASIC12.22□□□□□ -0.45
ZNF546Q86UE3 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 TFAMP1-201ENST00000412727 736 ntBASIC12.22□□□□□ -0.45
ZNF546Q86UE3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 AL662844.1-201ENST00000546340 181 ntBASIC12.22□□□□□ -0.45
ZNF546Q86UE3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 MAX-210ENST00000555419 765 ntTSL 5 BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 SAMD11P1-201ENST00000571429 661 ntBASIC12.22□□□□□ -0.45
ZNF546Q86UE3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms