Protein–RNA interactions for Protein: Q6ZWI9

RFPL4B, Ret finger protein-like 4B, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4BQ6ZWI9 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.25□□□□□ -0.29
RFPL4BQ6ZWI9 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RFPL4BQ6ZWI9 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RFPL4BQ6ZWI9 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RFPL4BQ6ZWI9 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.25□□□□□ -0.29
RFPL4BQ6ZWI9 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RFPL4BQ6ZWI9 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RFPL4BQ6ZWI9 AP006294.1-201ENST00000415407 339 ntBASIC13.25□□□□□ -0.29
RFPL4BQ6ZWI9 AL162726.2-201ENST00000438986 1017 ntBASIC13.25□□□□□ -0.29
RFPL4BQ6ZWI9 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.25□□□□□ -0.29
RFPL4BQ6ZWI9 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RFPL4BQ6ZWI9 AP001582.1-201ENST00000525856 295 ntBASIC13.25□□□□□ -0.29
RFPL4BQ6ZWI9 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.25□□□□□ -0.29
RFPL4BQ6ZWI9 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.25□□□□□ -0.29
RFPL4BQ6ZWI9 AC027307.3-201ENST00000594262 1100 ntBASIC13.25□□□□□ -0.29
RFPL4BQ6ZWI9 CU634019.7-201ENST00000624153 1185 ntBASIC13.25□□□□□ -0.29
RFPL4BQ6ZWI9 FP236241.2-201ENST00000624906 1185 ntBASIC13.25□□□□□ -0.29
RFPL4BQ6ZWI9 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RFPL4BQ6ZWI9 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.25□□□□□ -0.29
RFPL4BQ6ZWI9 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RFPL4BQ6ZWI9 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RFPL4BQ6ZWI9 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.25□□□□□ -0.29
RFPL4BQ6ZWI9 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RFPL4BQ6ZWI9 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RFPL4BQ6ZWI9 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RFPL4BQ6ZWI9 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.25□□□□□ -0.29
RFPL4BQ6ZWI9 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RFPL4BQ6ZWI9 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
RFPL4BQ6ZWI9 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.25□□□□□ -0.29
RFPL4BQ6ZWI9 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RFPL4BQ6ZWI9 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RFPL4BQ6ZWI9 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RFPL4BQ6ZWI9 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC13.25□□□□□ -0.29
RFPL4BQ6ZWI9 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RFPL4BQ6ZWI9 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RFPL4BQ6ZWI9 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
RFPL4BQ6ZWI9 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 AC012508.2-201ENST00000567613 1472 ntBASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 AC134407.3-201ENST00000624035 2139 ntBASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 AP005018.1-201ENST00000525475 301 ntBASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 AC005252.2-201ENST00000624630 1141 ntBASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 AL158070.2-201ENST00000623713 1621 ntBASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
RFPL4BQ6ZWI9 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RFPL4BQ6ZWI9 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.23□□□□□ -0.29
RFPL4BQ6ZWI9 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC13.23□□□□□ -0.29
RFPL4BQ6ZWI9 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RFPL4BQ6ZWI9 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RFPL4BQ6ZWI9 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RFPL4BQ6ZWI9 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.23□□□□□ -0.29
RFPL4BQ6ZWI9 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RFPL4BQ6ZWI9 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RFPL4BQ6ZWI9 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RFPL4BQ6ZWI9 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms