Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FOXR1Q6PIV2 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
FOXR1Q6PIV2 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FOXR1Q6PIV2 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FOXR1Q6PIV2 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC15.38■□□□□ 0.05
FOXR1Q6PIV2 INE2-201ENST00000630399 1874 ntBASIC15.38■□□□□ 0.05
FOXR1Q6PIV2 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.38■□□□□ 0.05
FOXR1Q6PIV2 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
FOXR1Q6PIV2 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FOXR1Q6PIV2 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
FOXR1Q6PIV2 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FOXR1Q6PIV2 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FOXR1Q6PIV2 CROCCP4-201ENST00000457096 498 ntBASIC15.38■□□□□ 0.05
FOXR1Q6PIV2 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
FOXR1Q6PIV2 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.38■□□□□ 0.05
FOXR1Q6PIV2 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
FOXR1Q6PIV2 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
FOXR1Q6PIV2 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.38■□□□□ 0.05
FOXR1Q6PIV2 MIR4259-201ENST00000584466 101 ntBASIC15.38■□□□□ 0.05
FOXR1Q6PIV2 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
FOXR1Q6PIV2 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FOXR1Q6PIV2 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
FOXR1Q6PIV2 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FOXR1Q6PIV2 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FOXR1Q6PIV2 AC087386.2-201ENST00000623212 4637 ntBASIC15.38■□□□□ 0.05
FOXR1Q6PIV2 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FOXR1Q6PIV2 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
FOXR1Q6PIV2 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC15.38■□□□□ 0.05
FOXR1Q6PIV2 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
FOXR1Q6PIV2 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
FOXR1Q6PIV2 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FOXR1Q6PIV2 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.38■□□□□ 0.05
FOXR1Q6PIV2 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 MIR6775-201ENST00000617557 69 ntBASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 AC090505.1-201ENST00000430515 1834 ntBASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 REXO1L6P-201ENST00000603433 1515 ntBASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
FOXR1Q6PIV2 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms