Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 AC009093.2-202ENST00000620513 2079 ntBASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC39BQ5VTQ0 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 TPT1P11-201ENST00000458482 498 ntBASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.3■□□□□ 0.04
TTC39BQ5VTQ0 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 SHC1P1-201ENST00000425230 1745 ntBASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 ST20-AS1-201ENST00000560255 4223 ntBASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 FAM86MP-201ENST00000340703 885 ntBASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 MIR663B-201ENST00000408361 115 ntBASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 AL354877.1-201ENST00000424412 413 ntBASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 AL591846.1-201ENST00000451736 433 ntBASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 MIR6799-201ENST00000620297 69 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms