Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC18.03■□□□□ 0.48
RC3H1Q5TC82 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
RC3H1Q5TC82 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RC3H1Q5TC82 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RC3H1Q5TC82 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RC3H1Q5TC82 SHMT1P1-201ENST00000419974 1312 ntBASIC18.02■□□□□ 0.48
RC3H1Q5TC82 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RC3H1Q5TC82 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RC3H1Q5TC82 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RC3H1Q5TC82 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RC3H1Q5TC82 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RC3H1Q5TC82 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RC3H1Q5TC82 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RC3H1Q5TC82 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RC3H1Q5TC82 AL357373.1-201ENST00000394974 322 ntBASIC18.02■□□□□ 0.48
RC3H1Q5TC82 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RC3H1Q5TC82 HNRNPA1P58-201ENST00000403629 610 ntBASIC18.02■□□□□ 0.48
RC3H1Q5TC82 AC073210.1-201ENST00000414799 232 ntBASIC18.02■□□□□ 0.48
RC3H1Q5TC82 AL929302.1-201ENST00000426556 871 ntBASIC18.02■□□□□ 0.48
RC3H1Q5TC82 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC18.02■□□□□ 0.48
RC3H1Q5TC82 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RC3H1Q5TC82 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RC3H1Q5TC82 AC100858.1-201ENST00000514059 1228 ntBASIC18.02■□□□□ 0.48
RC3H1Q5TC82 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC18.02■□□□□ 0.48
RC3H1Q5TC82 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC18.02■□□□□ 0.48
RC3H1Q5TC82 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RC3H1Q5TC82 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
RC3H1Q5TC82 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RC3H1Q5TC82 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RC3H1Q5TC82 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
RC3H1Q5TC82 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RC3H1Q5TC82 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RC3H1Q5TC82 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RC3H1Q5TC82 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RC3H1Q5TC82 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RC3H1Q5TC82 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC18.02■□□□□ 0.47
RC3H1Q5TC82 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC18.02■□□□□ 0.47
RC3H1Q5TC82 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RC3H1Q5TC82 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RC3H1Q5TC82 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC18.01■□□□□ 0.47
RC3H1Q5TC82 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RC3H1Q5TC82 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC18.01■□□□□ 0.47
RC3H1Q5TC82 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RC3H1Q5TC82 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC18.01■□□□□ 0.47
RC3H1Q5TC82 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RC3H1Q5TC82 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RC3H1Q5TC82 AC138761.6-201ENST00000583997 1423 ntBASIC18.01■□□□□ 0.47
RC3H1Q5TC82 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RC3H1Q5TC82 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RC3H1Q5TC82 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RC3H1Q5TC82 AF274858.1-201ENST00000406288 372 ntBASIC18.01■□□□□ 0.47
RC3H1Q5TC82 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC18.01■□□□□ 0.47
RC3H1Q5TC82 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC18.01■□□□□ 0.47
RC3H1Q5TC82 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC18.01■□□□□ 0.47
RC3H1Q5TC82 RN7SL128P-201ENST00000467883 305 ntBASIC18.01■□□□□ 0.47
RC3H1Q5TC82 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC18.01■□□□□ 0.47
RC3H1Q5TC82 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC18.01■□□□□ 0.47
RC3H1Q5TC82 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RC3H1Q5TC82 AL512310.5-201ENST00000551999 515 ntBASIC18.01■□□□□ 0.47
RC3H1Q5TC82 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC18.01■□□□□ 0.47
RC3H1Q5TC82 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RC3H1Q5TC82 AC005777.1-201ENST00000588332 187 ntBASIC18.01■□□□□ 0.47
RC3H1Q5TC82 APOC1-209ENST00000592885 562 ntTSL 3 BASIC18.01■□□□□ 0.47
RC3H1Q5TC82 AL136982.5-201ENST00000605222 294 ntBASIC18.01■□□□□ 0.47
RC3H1Q5TC82 AL627230.2-201ENST00000613254 655 ntBASIC18.01■□□□□ 0.47
RC3H1Q5TC82 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC18.01■□□□□ 0.47
RC3H1Q5TC82 CROCCP1-201ENST00000426910 5675 ntBASIC18.01■□□□□ 0.47
RC3H1Q5TC82 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
RC3H1Q5TC82 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC18.01■□□□□ 0.47
RC3H1Q5TC82 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RC3H1Q5TC82 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RC3H1Q5TC82 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RC3H1Q5TC82 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC18.01■□□□□ 0.47
RC3H1Q5TC82 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
RC3H1Q5TC82 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RC3H1Q5TC82 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RC3H1Q5TC82 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RC3H1Q5TC82 KRT8P43-201ENST00000406052 1458 ntBASIC18.01■□□□□ 0.47
RC3H1Q5TC82 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RC3H1Q5TC82 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC18■□□□□ 0.47
RC3H1Q5TC82 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RC3H1Q5TC82 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RC3H1Q5TC82 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RC3H1Q5TC82 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RC3H1Q5TC82 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
RC3H1Q5TC82 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RC3H1Q5TC82 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC18■□□□□ 0.47
RC3H1Q5TC82 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RC3H1Q5TC82 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC18■□□□□ 0.47
RC3H1Q5TC82 AC103592.1-201ENST00000394513 664 ntBASIC18■□□□□ 0.47
RC3H1Q5TC82 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
RC3H1Q5TC82 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms