Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 AC109322.1-201ENST00000524499 1264 ntBASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 FTH1-202ENST00000526640 786 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 SORD2P-201ENST00000558556 1069 ntBASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 AC138761.1-201ENST00000584393 385 ntBASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 SRD5A3P1-201ENST00000603021 949 ntBASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 AC027612.4-201ENST00000605371 583 ntBASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 AL590560.3-201ENST00000623350 461 ntBASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 AC100757.3-201ENST00000622361 1406 ntBASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
LINC00242Q5T6M2 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 AL365181.3-201ENST00000605886 3222 ntBASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 AC139712.1-201ENST00000378256 1875 ntBASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 RNU1-114P-201ENST00000365297 166 ntBASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 TEX30-203ENST00000376022 828 ntTSL 2 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 UPF3AP3-201ENST00000420996 769 ntBASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 AC107890.1-201ENST00000422478 521 ntBASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 AC092580.3-201ENST00000430932 139 ntBASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 RN7SL399P-201ENST00000471648 279 ntBASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 AC103988.2-201ENST00000561804 725 ntBASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 AL671883.3-201ENST00000603274 991 ntBASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 AC007431.3-201ENST00000623221 587 ntBASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC00242Q5T6M2 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms